RNA–Protein interactions for RNA: ENST00000454018.6

SYNE1-214, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 1,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-214ENST00000454018 OR4K15Q8NH41 348 aa7.18□□□□□ -1.26
SYNE1-214ENST00000454018 C15orf40Q8WUR7 153 aa7.18□□□□□ -1.26
SYNE1-214ENST00000454018 UPRTQ96BW1 309 aa7.18□□□□□ -1.26
SYNE1-214ENST00000454018 MIXL1Q9H2W2 232 aa7.18□□□□□ -1.26
SYNE1-214ENST00000454018 AUNIPQ9H7T9 357 aa7.18□□□□□ -1.26
SYNE1-214ENST00000454018 LINC00574Q9H8X3 128 aa7.18□□□□□ -1.26
SYNE1-214ENST00000454018 CALYQ9NYX4 217 aa7.18□□□□□ -1.26
SYNE1-214ENST00000454018 KCNIP1Q9NZI2 227 aa7.18□□□□□ -1.26
SYNE1-214ENST00000454018 RABL2AQ9UBK7 228 aaPredicted RBP7.18□□□□□ -1.26
SYNE1-214ENST00000454018 EXTL2Q9UBQ6 330 aa7.18□□□□□ -1.26
SYNE1-214ENST00000454018 PLA2G2DQ9UNK4 145 aa7.18□□□□□ -1.26
SYNE1-214ENST00000454018 RABL2BQ9UNT1 228 aa7.18□□□□□ -1.26
SYNE1-214ENST00000454018 FN1P02751 2386 aaKnown RBP7.18□□□□□ -1.26
SYNE1-214ENST00000454018 MEX3AA1L020 520 aaKnown RBP7.17□□□□□ -1.26
SYNE1-214ENST00000454018 NUDT19A8MXV4 375 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 SPINT2O43291 252 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 MELTFP08582 738 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 IGHV1-8P0DP01 117 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 RCC1P18754 421 aaPredicted RBP7.17□□□□□ -1.26
SYNE1-214ENST00000454018 PRTN3P24158 256 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 KIR2DS4P43632 304 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 KIR2DS1Q14954 304 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 HMGN3Q15651 99 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 OR52W1Q6IF63 320 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 CNIH2Q6PI25 160 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 ETV3LQ6ZN32 361 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 Q6ZS49 121 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 VMO1Q7Z5L0 202 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 WFDC3Q8IUB2 231 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 IZUMO1Q8IYV9 350 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 Q8N7P7 452 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 OR10A7Q8NGE5 316 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 CCDC107Q8WV48 283 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 NUDCD2Q8WVJ2 157 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 MISP3Q96FF7 219 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 DIRAS2Q96HU8 199 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 CYYR1Q96J86 154 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 TBX15Q96SF7 602 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 HDHD3Q9BSH5 251 aaPredicted RBP7.17□□□□□ -1.26
SYNE1-214ENST00000454018 PCGF1Q9BSM1 259 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 SESN1Q9Y6P5 492 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 TRAV39A0A0B4J263 110 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 TRAV40A0A0B4J280 105 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 C12orf77C9JDV5 145 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 NPIPB11E5RHQ5 1161 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 C15orf65H3BRN8 121 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 DIRAS3O95661 229 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 CGB3P0DN86 165 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 CGB7P0DN87 165 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 CBX5P45973 191 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 HLA-DRB3P79483 266 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 SRSF7Q16629 238 aaKnown RBP eCLIP7.17□□□□□ -1.26
SYNE1-214ENST00000454018 C17orf58Q2M2W7 97 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 CNPY1Q3B7I2 92 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 FAM120AOSQ5T036 256 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 PRAMEF5Q5TYX0 476 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 GPR157Q5UAW9 335 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 Q6ZPA2 131 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 C11orf42Q8N5U0 333 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 NANPQ8TBE9 248 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 SETD6Q8TBK2 473 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 ARL11Q969Q4 196 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 KIRREL1Q96J84 757 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 SCPEP1Q9HB40 452 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 TAF9BQ9HBM6 251 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 Q9N2K0 584 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 SIRT7Q9NRC8 400 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 C19orf73Q9NVV2 129 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 PTTG2Q9NZH5 202 aa7.17□□□□□ -1.26
SYNE1-214ENST00000454018 A0A087X0M5 115 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 A0A1B0GX30 115 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 PRSS29PA6NIE9 313 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 FSHBP01225 129 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 HLA-DQB1P01920 261 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 HBZP02008 142 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 OMGP23515 440 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 CD34P28906 385 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 PRSS3P35030 304 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 MRPS10P82664 201 aaKnown RBP7.16□□□□□ -1.26
SYNE1-214ENST00000454018 Q3ZCU0 254 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 ZNF782Q6ZMW2 699 aaPredicted RBP7.16□□□□□ -1.26
SYNE1-214ENST00000454018 OR52M1Q8NGK5 317 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 OR13D1Q8NGV5 346 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 TNFRSF14Q92956 283 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 GALMQ96C23 342 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 TMEM133Q9H2Q1 129 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 HEXA-AS1Q9H8Q6 139 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 ZNF286AQ9HBT8 521 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 IDI2-AS1Q9NZ38 188 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 CDC42EP3Q9UKI2 254 aa7.16□□□□□ -1.26
SYNE1-214ENST00000454018 ELF5Q9UKW6 265 aaPredicted RBP7.16□□□□□ -1.26
SYNE1-214ENST00000454018 MRPS7Q9Y2R9 242 aaKnown RBP7.16□□□□□ -1.26
SYNE1-214ENST00000454018 MXRA5Q9NR99 2828 aa7.15□□□□□ -1.26
SYNE1-214ENST00000454018 TRDCB7Z8K6 153 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 RNASEK-C17orf49H0YIS7 233 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 SULT1C2O00338 296 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 SDCBPO00560 298 aaPredicted RBP7.15□□□□□ -1.27
SYNE1-214ENST00000454018 FABP7O15540 132 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 SSX5O60225 188 aa7.15□□□□□ -1.27
SYNE1-214ENST00000454018 TNFSF8P32971 234 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms