RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 MARC2Q969Z3 335 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 CABLES2Q9BTV7 478 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 PLEKHA2Q9HB19 425 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 KALRNO60229 2985 aa9.91□□□□□ -0.82
VTA1-203ENST00000452973 A0A0G2JRQ6 117 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 B8ZZF3 427 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 KRBOX1C9JBD0 128 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 C12orf77C9JDV5 145 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 WRBO00258 174 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 TAAR5O14804 337 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 NUPL2O15504 423 aaKnown RBP9.9□□□□□ -0.82
VTA1-203ENST00000452973 UCP1P25874 307 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 SSTR5P35346 364 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 TIMP3P35625 211 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 RND3P61587 244 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 BTN1A1Q13410 526 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 KRBOX4Q5JUW0 171 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 GFRALQ6UXV0 394 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 TMEM217Q8N7C4 229 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 GALMQ96C23 342 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 OR2V2Q96R30 315 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 H3BP45 60 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 IGHV3-13P01766 116 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 IGHV3-7P01780 117 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 FAM87AP0C7U9 286 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 FAM157CP0CG43 387 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 EGR1P18146 543 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 VDAC1P21796 283 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 KLF3P57682 345 aaPredicted RBP9.9□□□□□ -0.82
VTA1-203ENST00000452973 VAMP2P63027 116 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 SMIM21Q3B7S5 101 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 MOB1BQ7L9L4 216 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 MOGAT3Q86VF5 341 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 COQ2Q96H96 371 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 WFDC1Q9HC57 220 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 HES4Q9HCC6 221 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 POMT1Q9Y6A1 747 aa9.9□□□□□ -0.82
VTA1-203ENST00000452973 USF3Q68DE3 2245 aa9.9□□□□□ -0.83
VTA1-203ENST00000452973 RELNP78509 3460 aa9.9□□□□□ -0.83
VTA1-203ENST00000452973 H0Y980 276 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 JTBO76095 146 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 CST7O76096 145 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 HBZP02008 142 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 PPP1CCP36873 323 aaKnown RBP9.89□□□□□ -0.83
VTA1-203ENST00000452973 SRSF3P84103 164 aaKnown RBP9.89□□□□□ -0.83
VTA1-203ENST00000452973 BOD1Q96IK1 185 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 SPEF1Q9Y4P9 236 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 A8MXE2 369 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 GPR137BO60478 399 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 IGLV2-14P01704 120 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 EIF5AP63241 154 aaKnown RBP9.89□□□□□ -0.83
VTA1-203ENST00000452973 PXDC1Q5TGL8 231 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 WFDC8Q8IUA0 241 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 NINJ1Q92982 152 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 SPIN2AQ99865 258 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 SPIN2BQ9BPZ2 258 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 SFXN3Q9BWM7 321 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 OR2D2Q9H210 308 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 MBNL3Q9NUK0 354 aaKnown RBP9.89□□□□□ -0.83
VTA1-203ENST00000452973 LPAR3Q9UBY5 353 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 A0A0G2JNJ9 132 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 A0A1B0GV50 99 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 FGF16O43320 207 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 HEXAP06865 529 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 LPAR6P43657 344 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 EIF5AL1Q6IS14 154 aaKnown RBP9.89□□□□□ -0.83
VTA1-203ENST00000452973 BTNL3Q6UXE8 466 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 OR2C3Q8N628 320 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 CD177Q8N6Q3 437 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 Q8NA96 180 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 OR5D13Q8NGL4 314 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 ARL11Q969Q4 196 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 Q9UFV3 132 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 RFNGQ9Y644 331 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 ATRXP46100 2492 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 ZZEF1O43149 2961 aa9.89□□□□□ -0.83
VTA1-203ENST00000452973 POLEQ07864 2286 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 CHST1O43916 411 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 PVALBP20472 110 aaPredicted RBP9.88□□□□□ -0.83
VTA1-203ENST00000452973 PRDX2P32119 198 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 P2RY1P47900 373 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 TBR1Q16650 682 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 NMSQ5H8A3 153 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 DRAM1Q8N682 238 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 ZNRF1Q8ND25 227 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 OR13A1Q8NGR1 328 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 SH3BGRL3Q9H299 93 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 PIGMQ9H3S5 423 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 TREM1Q9NP99 234 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 ZFP57Q9NU63 452 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 PLA2G2EQ9NZK7 142 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 NUP50Q9UKX7 468 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 WIPI2Q9Y4P8 454 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 C1QL1O75973 258 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 CEACAM8P31997 349 aaPredicted RBP9.88□□□□□ -0.83
VTA1-203ENST00000452973 LINC00205P59089 165 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 EWSR1Q01844 656 aaKnown RBP eCLIP9.88□□□□□ -0.83
VTA1-203ENST00000452973 HMGN3Q15651 99 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 FAM209AQ5JX71 171 aa9.88□□□□□ -0.83
VTA1-203ENST00000452973 DEFB108BQ8NET1 73 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms