RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 Q6ZR03 302 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 LRP11Q86VZ4 500 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 NUDCD2Q8WVJ2 157 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 SYT3Q9BQG1 590 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 PCGF1Q9BSM1 259 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 USP24Q9UPU5 2620 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 CACNA1BQ00975 2339 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 FOXI3A8MTJ6 420 aaPredicted RBP6.85□□□□□ -1.31
CCDC39-201ENST00000442201 SERPINE3A8MV23 424 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 CA11O75493 328 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 GRPP07492 148 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 IL2RGP31785 369 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 FAUP35544 74 aaKnown RBP6.85□□□□□ -1.31
CCDC39-201ENST00000442201 UQCRFS1P47985 274 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 RBM11P57052 281 aaKnown RBP6.85□□□□□ -1.31
CCDC39-201ENST00000442201 FGF12P61328 243 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 PJVKQ0ZLH3 352 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 IGFBP7Q16270 282 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 PIGYQ3MUY2 71 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 KHDC3LQ587J8 217 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 TRAPPC6BQ86SZ2 158 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 WDR86Q86TI4 376 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 THNSL2Q86YJ6 484 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 GALNT14Q96FL9 552 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.85□□□□□ -1.31
CCDC39-201ENST00000442201 PLEKHJ1Q9NW61 149 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 DOK5Q9P104 306 aa6.85□□□□□ -1.31
CCDC39-201ENST00000442201 FXYD6-FXYD2A0A087WZ82 144 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 VSTM5A8MXK1 200 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 F5H5P2 479 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 DVL1O14640 695 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 GEMIN2O14893 280 aaKnown RBP6.84□□□□□ -1.31
CCDC39-201ENST00000442201 SOX15O60248 233 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 CD5P06127 495 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 EPHA1P21709 976 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 TLE4Q04727 773 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 RBM39Q14498 530 aaKnown RBP6.84□□□□□ -1.31
CCDC39-201ENST00000442201 CDSNQ15517 529 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 HMGN3Q15651 99 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 BATF2Q8N1L9 274 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 SCCPDHQ8NBX0 429 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 LINC01560Q8TB33 94 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 MRPL24Q96A35 216 aaKnown RBP6.84□□□□□ -1.31
CCDC39-201ENST00000442201 PECRQ9BY49 303 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 FXYD6Q9H0Q3 95 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 PLK3Q9H4B4 646 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 ZNF442Q9H7R0 627 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 HRASLSQ9HDD0 168 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 OR14J1Q9UGF5 321 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 ATP23Q9Y6H3 246 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 TRAV14DV4A0A0A6YYC5 116 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 FAM90A10PA6NDY2 464 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 FAM90A18PA6NE21 464 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 FAM90A16PA6NEW6 464 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 FAM90A20PA6NIJ5 464 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 FAM90A8PA6NJQ4 464 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 FAM90A7PA6NKC0 464 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 FAM90A22PA8MWA6 464 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 FAM90A12PA8MX19 464 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 FAM90A5PA8MXJ8 464 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 FAM90A23PA8MXZ1 464 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 CDIPTO14735 213 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 OR7C1O76099 320 aaPredicted RBP6.84□□□□□ -1.31
CCDC39-201ENST00000442201 OR2F2O95006 317 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 MT-ND4P03905 459 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 FAM90A15PP0C7V4 464 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 FAM90A13PP0C7W8 464 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 FAM90A14PP0C7W9 464 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 FAM90A24PP0C7X0 464 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 ZNF16P17020 682 aaPredicted RBP6.84□□□□□ -1.31
CCDC39-201ENST00000442201 GRNP28799 593 aaKnown RBP6.84□□□□□ -1.31
CCDC39-201ENST00000442201 SRSF4Q08170 494 aaKnown RBP6.84□□□□□ -1.31
CCDC39-201ENST00000442201 OR2F1Q13607 317 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 MST1LQ2TV78 715 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 OLFML2AQ68BL7 652 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 HEPN1Q6WQI6 88 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 C6orf201Q7Z4U5 140 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 RTN4RL2Q86UN3 420 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 Q8IYB0 196 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 OR2Z1Q8NG97 314 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 RHOFQ9HBH0 211 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 GPN1Q9HCN4 374 aaPredicted RBP6.84□□□□□ -1.31
CCDC39-201ENST00000442201 TAAR3PQ9P1P4 343 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 ZNF107Q9UII5 783 aaPredicted RBP6.84□□□□□ -1.31
CCDC39-201ENST00000442201 HSF4Q9ULV5 492 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 RPH3ALQ9UNE2 315 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 KALRNO60229 2985 aa6.84□□□□□ -1.31
CCDC39-201ENST00000442201 IGHV3-64DA0A0J9YX35 117 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 hCG_1809904A0A1W2PP81 198 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 A0A1W2PPH5 198 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 A0A1W2PR64 198 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 A0A1W2PRV1 198 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 F8VVB4 439 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 F8VWA3 439 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 RHBDL1O75783 438 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 AKAIN1P0CW23 69 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 CHATP28329 748 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 TAS2R19P59542 299 aa6.84□□□□□ -1.32
CCDC39-201ENST00000442201 KIAA0141Q14154 515 aaPredicted RBP6.84□□□□□ -1.32
CCDC39-201ENST00000442201 ACTBL2Q562R1 376 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms