RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 PDLIM4P50479 330 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 RPL31P62899 125 aaKnown RBP15.07■□□□□ 0
HMGN1-206ENST00000431390 CARTPTQ16568 116 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 ZNF841Q6ZN19 808 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 TCF23Q7RTU1 214 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 CADM3Q8N126 398 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 ZFAND1Q8TCF1 268 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 TAS2R3Q9NYW6 316 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 ZNF69Q9UC07 566 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 FAM172BPA6NC97 362 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 ZNF729A6NN14 1252 aaPredicted RBP15.07■□□□□ 0
HMGN1-206ENST00000431390 PGAM2P15259 253 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 TAS2R31P59538 309 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 METTL11BQ5VVY1 283 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 FAHD2BQ6P2I3 314 aaPredicted RBP15.07■□□□□ 0
HMGN1-206ENST00000431390 GLDNQ6ZMI3 551 aaPredicted RBP15.07■□□□□ 0
HMGN1-206ENST00000431390 TMED4Q7Z7H5 227 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 SLC25A42Q86VD7 318 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 UBALD1Q8TB05 177 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 FAHD2AQ96GK7 314 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 LINC00574Q9H8X3 128 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 PATZ1Q9HBE1 687 aaKnown RBP15.07■□□□□ 0
HMGN1-206ENST00000431390 CALYQ9NYX4 217 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 OR1A1Q9P1Q5 309 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 OR2W1Q9Y3N9 320 aa15.07■□□□□ 0
HMGN1-206ENST00000431390 FLNAP21333 2647 aaKnown RBP15.06■□□□□ 0
HMGN1-206ENST00000431390 TRBV23-1A0A0A0MS06 115 aa15.06■□□□□ 0
HMGN1-206ENST00000431390 KBTBD11-OT1A0A1B0GTJ5 212 aa15.06■□□□□ 0
HMGN1-206ENST00000431390 F5H0A9 414 aaPredicted RBP15.06■□□□□ 0
HMGN1-206ENST00000431390 F2RL2O00254 374 aa15.06■□□□□ 0
HMGN1-206ENST00000431390 CTSDP07339 412 aaPredicted RBP15.06■□□□□ 0
HMGN1-206ENST00000431390 ZNF728P0DKX0 622 aa15.06■□□□□ 0
HMGN1-206ENST00000431390 UBE2MP61081 183 aaKnown RBP15.06■□□□□ 0
HMGN1-206ENST00000431390 C17orf58Q2M2W7 97 aa15.06■□□□□ 0
HMGN1-206ENST00000431390 TMEM30BQ3MIR4 351 aa15.06■□□□□ 0
HMGN1-206ENST00000431390 LPCAT3Q6P1A2 487 aa15.06■□□□□ 0
HMGN1-206ENST00000431390 ZNF525Q8N782 197 aa15.06■□□□□ 0
HMGN1-206ENST00000431390 BEX2Q9BXY8 128 aa15.06■□□□□ 0
HMGN1-206ENST00000431390 GHITMQ9H3K2 345 aa15.06■□□□□ 0
HMGN1-206ENST00000431390 C5orf66Q9H5L9 145 aa15.06■□□□□ 0
HMGN1-206ENST00000431390 BEX1Q9HBH7 125 aa15.06■□□□□ 0
HMGN1-206ENST00000431390 GPN1Q9HCN4 374 aaPredicted RBP15.06■□□□□ 0
HMGN1-206ENST00000431390 C19orf12Q9NSK7 152 aa15.06■□□□□ 0
HMGN1-206ENST00000431390 CLN8Q9UBY8 286 aa15.06■□□□□ 0
HMGN1-206ENST00000431390 JPT1Q9UK76 154 aa15.06■□□□□ 0
HMGN1-206ENST00000431390 C14orf166Q9Y224 244 aaKnown RBP15.06■□□□□ 0
HMGN1-206ENST00000431390 DOCK11Q5JSL3 2073 aa15.05■□□□□ 0
HMGN1-206ENST00000431390 A0A0A6YYJ9 748 aa15.05■□□□□ -0
HMGN1-206ENST00000431390 VSIG10L2P0DP72 767 aa15.05■□□□□ -0
HMGN1-206ENST00000431390 FOSL1P15407 271 aa15.05■□□□□ -0
HMGN1-206ENST00000431390 CEACAM6P40199 344 aa15.05■□□□□ -0
HMGN1-206ENST00000431390 ATP5J2P56134 94 aa15.05■□□□□ -0
HMGN1-206ENST00000431390 FXYD4P59646 89 aa15.05■□□□□ -0
HMGN1-206ENST00000431390 BAMBIQ13145 260 aa15.05■□□□□ -0
HMGN1-206ENST00000431390 Q71RC1 249 aaPredicted RBP15.05■□□□□ -0
HMGN1-206ENST00000431390 SLC38A6Q8IZM9 456 aa15.05■□□□□ -0
HMGN1-206ENST00000431390 CHAC2Q8WUX2 184 aa15.05■□□□□ -0
HMGN1-206ENST00000431390 H1FXQ92522 213 aaKnown RBP15.05■□□□□ -0
HMGN1-206ENST00000431390 TOMM40LQ969M1 308 aa15.05■□□□□ -0
HMGN1-206ENST00000431390 RTBDNQ9BSG5 229 aaPredicted RBP15.05■□□□□ -0
HMGN1-206ENST00000431390 GSX2Q9BZM3 304 aa15.05■□□□□ -0
HMGN1-206ENST00000431390 GAL3ST2Q9H3Q3 398 aa15.05■□□□□ -0
HMGN1-206ENST00000431390 RDH8Q9NYR8 311 aa15.05■□□□□ -0
HMGN1-206ENST00000431390 SNRPGP15A8MWD9 76 aa15.04■□□□□ -0
HMGN1-206ENST00000431390 NDUFS8O00217 210 aa15.04■□□□□ -0
HMGN1-206ENST00000431390 OR4E1P0C645 316 aa15.04■□□□□ -0
HMGN1-206ENST00000431390 WDR25Q64LD2 544 aaPredicted RBP15.04■□□□□ -0
HMGN1-206ENST00000431390 RFESDQ8TAC1 157 aa15.04■□□□□ -0
HMGN1-206ENST00000431390 FAM216AQ8WUB2 273 aa15.04■□□□□ -0
HMGN1-206ENST00000431390 ZNF486Q96H40 463 aaPredicted RBP15.04■□□□□ -0
HMGN1-206ENST00000431390 SMR3AQ99954 134 aa15.04■□□□□ -0
HMGN1-206ENST00000431390 OR2S2Q9NQN1 319 aa15.04■□□□□ -0
HMGN1-206ENST00000431390 ZNF221Q9UK13 617 aa15.04■□□□□ -0
HMGN1-206ENST00000431390 VPS13CQ709C8 3753 aa15.04■□□□□ -0
HMGN1-206ENST00000431390 MEX3AA1L020 520 aaKnown RBP15.03■□□□□ -0
HMGN1-206ENST00000431390 DHODHQ02127 395 aa15.03■□□□□ -0
HMGN1-206ENST00000431390 C11orf91Q3C1V1 193 aa15.03■□□□□ -0
HMGN1-206ENST00000431390 TMEM128Q5BJH2 165 aa15.03■□□□□ -0
HMGN1-206ENST00000431390 TMEM200BQ69YZ2 307 aa15.03■□□□□ -0
HMGN1-206ENST00000431390 ADAD2Q8NCV1 583 aaKnown RBP15.03■□□□□ -0
HMGN1-206ENST00000431390 OR10A7Q8NGE5 316 aa15.03■□□□□ -0
HMGN1-206ENST00000431390 OR52L2PQ8NGH6 319 aa15.03■□□□□ -0
HMGN1-206ENST00000431390 OR10V1Q8NGI7 309 aa15.03■□□□□ -0
HMGN1-206ENST00000431390 DACT3Q96B18 629 aaPredicted RBP15.03■□□□□ -0
HMGN1-206ENST00000431390 ZNF714Q96N38 554 aa15.03■□□□□ -0
HMGN1-206ENST00000431390 RSRP1Q9BUV0 290 aa15.03■□□□□ -0
HMGN1-206ENST00000431390 IGKV1D-13A0A0B4J2D9 117 aa15.02■□□□□ -0
HMGN1-206ENST00000431390 CREBL2O60519 120 aaPredicted RBP15.02■□□□□ -0
HMGN1-206ENST00000431390 IGKV1-13P0DP09 117 aa15.02■□□□□ -0
HMGN1-206ENST00000431390 LUMP51884 338 aaPredicted RBP15.02■□□□□ -0
HMGN1-206ENST00000431390 CBX3Q13185 183 aa15.02■□□□□ -0
HMGN1-206ENST00000431390 ZNF273Q14593 569 aa15.02■□□□□ -0
HMGN1-206ENST00000431390 C4orf46Q504U0 113 aa15.02■□□□□ -0
HMGN1-206ENST00000431390 ZNF626Q68DY1 528 aa15.02■□□□□ -0
HMGN1-206ENST00000431390 FAM185AQ8N0U4 392 aa15.02■□□□□ -0
HMGN1-206ENST00000431390 WFDC11Q8NEX6 87 aa15.02■□□□□ -0
HMGN1-206ENST00000431390 OR52M1Q8NGK5 317 aa15.02■□□□□ -0
HMGN1-206ENST00000431390 C8orf46Q8TAG6 207 aa15.02■□□□□ -0
HMGN1-206ENST00000431390 CAPSLQ8WWF8 208 aa15.02■□□□□ -0
HMGN1-206ENST00000431390 TMEM230Q96A57 120 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms