RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 OR2A7Q96R45 310 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 NUDT3O95989 172 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 FZD5Q13467 585 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 PARD6GQ9BYG4 376 aaPredicted RBP12.67□□□□□ -0.38
PTPN13-203ENST00000427191 TRAV30A0A087WSZ9 112 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 RPL36A-HNRNPH2H7BZ11 118 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 LEPROTL1O95214 131 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 VAX1Q5SQQ9 334 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 IBA57Q5T440 356 aaKnown RBP12.67□□□□□ -0.38
PTPN13-203ENST00000427191 SGK494Q96LW2 274 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 LDLRAD3Q86YD5 345 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 FAM131CQ96AQ9 280 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 ABHD14AQ9BUJ0 271 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 FBLL1A6NHQ2 334 aaKnown RBP12.67□□□□□ -0.38
PTPN13-203ENST00000427191 HOXD4P09016 255 aaPredicted RBP12.67□□□□□ -0.38
PTPN13-203ENST00000427191 TRGC1P0CF51 173 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 SELENOPP49908 381 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 EMP1P54849 157 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 MRM2Q9UI43 246 aaKnown RBP12.67□□□□□ -0.38
PTPN13-203ENST00000427191 C3orf80F5H4A9 247 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 KLK10O43240 276 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 KLF9Q13886 244 aaPredicted RBP12.67□□□□□ -0.38
PTPN13-203ENST00000427191 LEMD1Q68G75 181 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 CYB5R2Q6BCY4 276 aa12.67□□□□□ -0.38
PTPN13-203ENST00000427191 RTN4RL1Q86UN2 441 aaPredicted RBP12.66□□□□□ -0.38
PTPN13-203ENST00000427191 SH3BGRL3Q9H299 93 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 PRNTQ86SH4 94 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 MEGF10Q96KG7 1140 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 LIPFP07098 398 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 ORAI1Q96D31 301 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 ZNF98A6NK75 572 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 SPINK9Q5DT21 86 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 HOGA1Q86XE5 327 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 CBLN2Q8IUK8 224 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 C17orf47Q8NEP4 570 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 PHLDA3Q9Y5J5 127 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 PAPPA2Q9BXP8 1791 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 TCF23Q7RTU1 214 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 MRGPRFQ96AM1 343 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 MARS2Q96GW9 593 aaKnown RBP12.66□□□□□ -0.38
PTPN13-203ENST00000427191 PEF1Q9UBV8 284 aaKnown RBP12.66□□□□□ -0.38
PTPN13-203ENST00000427191 MBD1Q9UIS9 605 aaPredicted RBP12.66□□□□□ -0.38
PTPN13-203ENST00000427191 PRSS8Q16651 343 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 TM4SF20Q53R12 229 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 HCSTQ9UBK5 93 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 TMEM56-RWDD3S4R434 201 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 V9GYH0 126 aa12.66□□□□□ -0.38
PTPN13-203ENST00000427191 A0A0U1RQV5 110 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 LIPT2A6NK58 231 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 KCNE5Q9UJ90 142 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 IL4P05112 153 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 ISOC2Q96AB3 205 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 KIR2DL4Q99706 377 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 SCN7AQ01118 1682 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 C11orf68Q9H3H3 251 aaKnown RBP12.65□□□□□ -0.38
PTPN13-203ENST00000427191 HSPB7Q9UBY9 170 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 RABAC1Q9UI14 185 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 TP53BP1Q12888 1972 aaPredicted RBP12.65□□□□□ -0.38
PTPN13-203ENST00000427191 FAM90A10PA6NDY2 464 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 FAM90A18PA6NE21 464 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 FAM90A16PA6NEW6 464 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 FAM90A20PA6NIJ5 464 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 FAM90A8PA6NJQ4 464 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 FAM90A7PA6NKC0 464 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 FAM90A22PA8MWA6 464 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 FAM90A12PA8MX19 464 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 FAM90A5PA8MXJ8 464 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 FAM90A23PA8MXZ1 464 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 FAM90A15PP0C7V4 464 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 FAM90A13PP0C7W8 464 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 FAM90A14PP0C7W9 464 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 FAM90A24PP0C7X0 464 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 PGLYRP3Q96LB9 341 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 RHNO1Q9BSD3 238 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 IGHV3-43A0A0B4J1X8 118 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 IGHV3-43DP0DP04 118 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 FFAR1O14842 300 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 HINT1P49773 126 aaPredicted RBP12.65□□□□□ -0.38
PTPN13-203ENST00000427191 ZNF880Q6PDB4 577 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 MBD3L1Q8WWY6 194 aa12.65□□□□□ -0.38
PTPN13-203ENST00000427191 CCL4L1Q8NHW4 92 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 WNT16Q9UBV4 365 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 LAMTOR1Q6IAA8 161 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 NEUROG1Q92886 237 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 ZNF646O15015 1829 aaPredicted RBP12.64□□□□□ -0.39
PTPN13-203ENST00000427191 FAM106CPP0CH98 169 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 C10orf128Q5T292 105 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 ZNF793Q6ZN11 406 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 SPNS2Q8IVW8 549 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 OR1P1Q8NH06 330 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 NPBWR2P48146 333 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 GCSAMQ8N6F7 178 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 OR2H1Q9GZK4 316 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 TUBD1Q9UJT1 453 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 A0A1W2PQM1 296 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 TMEM240Q5SV17 173 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 HSPB9Q9BQS6 159 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 RBM38Q9H0Z9 239 aaKnown RBP12.64□□□□□ -0.39
PTPN13-203ENST00000427191 RHBDD2Q6NTF9 364 aa12.64□□□□□ -0.39
PTPN13-203ENST00000427191 TP53I13Q8NBR0 393 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms