RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 EGLN1Q9GZT9 426 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 DYNLRB1Q9NP97 96 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 DUX4Q9UBX2 424 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 TEX13DA0A0J9YY54 714 aaPredicted RBP17.47■□□□□ 0.39
GPC1-202ENST00000420138 OOEPA6NGQ2 149 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 MGST3O14880 152 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 DEFB108BQ8NET1 73 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 MRGPRDQ8TDS7 321 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 PARP12Q9H0J9 701 aaKnown RBP17.47■□□□□ 0.39
GPC1-202ENST00000420138 CCL28Q9NRJ3 127 aa17.47■□□□□ 0.39
GPC1-202ENST00000420138 IRF2P14316 349 aa17.46■□□□□ 0.39
GPC1-202ENST00000420138 MUC1P15941 1255 aaPredicted RBP17.46■□□□□ 0.39
GPC1-202ENST00000420138 TMEM187Q14656 261 aa17.46■□□□□ 0.39
GPC1-202ENST00000420138 ZNF788Q6ZQV5 615 aa17.46■□□□□ 0.39
GPC1-202ENST00000420138 MUC15Q8N387 334 aa17.46■□□□□ 0.39
GPC1-202ENST00000420138 PCNPQ8WW12 178 aaKnown RBP17.46■□□□□ 0.39
GPC1-202ENST00000420138 LURAP1Q96LR2 239 aa17.46■□□□□ 0.39
GPC1-202ENST00000420138 GAFA1Q96PS6 74 aa17.46■□□□□ 0.39
GPC1-202ENST00000420138 VRK1Q99986 396 aaPredicted RBP17.46■□□□□ 0.39
GPC1-202ENST00000420138 SLC5A7Q9GZV3 580 aa17.46■□□□□ 0.39
GPC1-202ENST00000420138 METTL8Q9H825 291 aaKnown RBP17.46■□□□□ 0.39
GPC1-202ENST00000420138 KCNIP1Q9NZI2 227 aa17.46■□□□□ 0.39
GPC1-202ENST00000420138 KANTRA0A1W2PQU2 76 aa17.45■□□□□ 0.38
GPC1-202ENST00000420138 MPTX1A8MV57 137 aa17.45■□□□□ 0.38
GPC1-202ENST00000420138 C15orf65H3BRN8 121 aa17.45■□□□□ 0.38
GPC1-202ENST00000420138 HBZP02008 142 aa17.45■□□□□ 0.38
GPC1-202ENST00000420138 OR5AC1P0C628 307 aa17.45■□□□□ 0.38
GPC1-202ENST00000420138 RND3P61587 244 aa17.45■□□□□ 0.38
GPC1-202ENST00000420138 EDDM3AQ14507 147 aa17.45■□□□□ 0.38
GPC1-202ENST00000420138 CR1LQ2VPA4 569 aa17.45■□□□□ 0.38
GPC1-202ENST00000420138 SP6Q3SY56 376 aa17.45■□□□□ 0.38
GPC1-202ENST00000420138 FAM53AQ6NSI3 398 aaPredicted RBP17.45■□□□□ 0.38
GPC1-202ENST00000420138 ZNF561Q8N587 486 aa17.45■□□□□ 0.38
GPC1-202ENST00000420138 MBD2Q9UBB5 411 aa17.45■□□□□ 0.38
GPC1-202ENST00000420138 RNF222A6NCQ9 220 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 TMEM178BH3BS89 294 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 GPR31O00270 319 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 IGLV2-14P01704 120 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 GYPAP02724 150 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 SSTR5P35346 364 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 UBA52P62987 128 aaKnown RBP17.44■□□□□ 0.38
GPC1-202ENST00000420138 ALKAL2Q6UX46 152 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 INO80EQ8NBZ0 244 aaPredicted RBP17.44■□□□□ 0.38
GPC1-202ENST00000420138 PPP1R35Q8TAP8 253 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 GLYATL2Q8WU03 294 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 C2orf50Q96LR7 162 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 ODAMA1E959 279 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 MEX3AA1L020 520 aaKnown RBP17.44■□□□□ 0.38
GPC1-202ENST00000420138 LRRC30A6NM36 301 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 MPPED1O15442 326 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 BCL2L11O43521 198 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 COMMD7Q86VX2 200 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 ZNF565Q8N9K5 539 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 GALMQ96C23 342 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 MSI2Q96DH6 328 aaKnown RBP17.44■□□□□ 0.38
GPC1-202ENST00000420138 CCL13Q99616 98 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 TOLLIPQ9H0E2 274 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 TMEM106BQ9NUM4 274 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 KCNIP3Q9Y2W7 256 aa17.44■□□□□ 0.38
GPC1-202ENST00000420138 ZNF462Q96JM2 2506 aa17.43■□□□□ 0.38
GPC1-202ENST00000420138 C19orf84I3L1E1 186 aa17.43■□□□□ 0.38
GPC1-202ENST00000420138 HSD17B6O14756 317 aa17.43■□□□□ 0.38
GPC1-202ENST00000420138 CEACAM6P40199 344 aa17.43■□□□□ 0.38
GPC1-202ENST00000420138 P2RX3P56373 397 aa17.43■□□□□ 0.38
GPC1-202ENST00000420138 FAM185AQ8N0U4 392 aa17.43■□□□□ 0.38
GPC1-202ENST00000420138 CCDC71LQ8N9Z2 235 aa17.43■□□□□ 0.38
GPC1-202ENST00000420138 OR10V1Q8NGI7 309 aa17.43■□□□□ 0.38
GPC1-202ENST00000420138 TP53RKQ96S44 253 aa17.43■□□□□ 0.38
GPC1-202ENST00000420138 GPHA2Q96T91 129 aa17.43■□□□□ 0.38
GPC1-202ENST00000420138 LGALS8O00214 317 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 SPDEFO95238 335 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 RRASP10301 218 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 TBC1D26Q86UD7 250 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 FAM216BQ8N7L0 139 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 LRTM2Q8N967 370 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 BVESQ8NE79 360 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 OR52L2PQ8NGH6 319 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 ST8SIA2Q92186 375 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 CCL17Q92583 94 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 OR10C1Q96KK4 312 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 RNF126Q9BV68 326 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 SUCNR1Q9BXA5 334 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 NCOR1P1Q9H4R4 102 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 ZNF665Q9H7R5 613 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 TNFRSF13BO14836 293 aaPredicted RBP17.42■□□□□ 0.38
GPC1-202ENST00000420138 SIGLEC5O15389 551 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 HSPA12AO43301 675 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 HOXB5P09067 269 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 CGB3P0DN86 165 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 CGB7P0DN87 165 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 GNMTQ14749 295 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 LHFPL5Q8TAF8 219 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 RALYQ9UKM9 306 aaKnown RBP17.42■□□□□ 0.38
GPC1-202ENST00000420138 DYSFO75923 2080 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 PKDREJQ9NTG1 2253 aa17.42■□□□□ 0.38
GPC1-202ENST00000420138 C3orf85A0A1B0GTC6 90 aa17.41■□□□□ 0.38
GPC1-202ENST00000420138 A0A1W2PPR1 153 aa17.41■□□□□ 0.38
GPC1-202ENST00000420138 IL2RGP31785 369 aa17.41■□□□□ 0.38
GPC1-202ENST00000420138 IL15RAQ13261 267 aa17.41■□□□□ 0.38
GPC1-202ENST00000420138 LIAT1Q6ZQX7 453 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms