RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 IL22RA2Q969J5 263 aa13.22□□□□□ -0.29
LIMS2-205ENST00000409455 IMMP1LQ96LU5 166 aa13.22□□□□□ -0.29
LIMS2-205ENST00000409455 RAB40CQ96S21 281 aa13.22□□□□□ -0.29
LIMS2-205ENST00000409455 MAP1LC3BQ9GZQ8 125 aa13.22□□□□□ -0.29
LIMS2-205ENST00000409455 FUT9Q9Y231 359 aa13.22□□□□□ -0.29
LIMS2-205ENST00000409455 EP300Q09472 2414 aaPredicted RBP13.22□□□□□ -0.29
LIMS2-205ENST00000409455 ZNF318Q5VUA4 2279 aa13.22□□□□□ -0.29
LIMS2-205ENST00000409455 A0A1W2PNU3 283 aaPredicted RBP13.21□□□□□ -0.29
LIMS2-205ENST00000409455 ZNF737O75373 536 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 CNOT4O95628 575 aaKnown RBP13.21□□□□□ -0.29
LIMS2-205ENST00000409455 HRASP01112 189 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 COX6A1P12074 109 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 GZMHP20718 246 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 MDH2P40926 338 aaKnown RBP13.21□□□□□ -0.29
LIMS2-205ENST00000409455 TDGF1P3P51864 188 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 PRSS12P56730 875 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 SERF2P84101 59 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 TEX38Q6PEX7 206 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 DHRS13Q6UX07 377 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 SSX7Q7RTT5 188 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 RNF138Q8WVD3 245 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 TMEM37Q8WXS4 190 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 PCGF1Q9BSM1 259 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 IGLV3-32A0A0A0MS00 114 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 DHHO43323 396 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 KBTBD11O94819 623 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 SCGB1D1O95968 90 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 ACTL10Q5JWF8 245 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 FOXL2NBQ6ZUU3 175 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 OR10G3Q8NGC4 313 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 OR51I2Q9H344 312 aa13.21□□□□□ -0.29
LIMS2-205ENST00000409455 H0Y980 276 aa13.2□□□□□ -0.3
LIMS2-205ENST00000409455 FOLR3P41439 243 aa13.2□□□□□ -0.3
LIMS2-205ENST00000409455 MEF2BQ02080 365 aaPredicted RBP13.2□□□□□ -0.3
LIMS2-205ENST00000409455 TMEM41BQ5BJD5 291 aa13.2□□□□□ -0.3
LIMS2-205ENST00000409455 OR2M3Q8NG83 312 aa13.2□□□□□ -0.3
LIMS2-205ENST00000409455 TMEM54Q969K7 222 aa13.2□□□□□ -0.3
LIMS2-205ENST00000409455 RPUSD4Q96CM3 377 aaKnown RBP13.2□□□□□ -0.3
LIMS2-205ENST00000409455 RASL10BQ96S79 203 aa13.2□□□□□ -0.3
LIMS2-205ENST00000409455 PLK3Q9H4B4 646 aa13.2□□□□□ -0.3
LIMS2-205ENST00000409455 PCNX2A6NKB5 2137 aa13.2□□□□□ -0.3
LIMS2-205ENST00000409455 SLC22A20A6NK97 555 aa13.2□□□□□ -0.3
LIMS2-205ENST00000409455 C9orf172C9J069 976 aa13.2□□□□□ -0.3
LIMS2-205ENST00000409455 MT-CO3P00414 261 aa13.2□□□□□ -0.3
LIMS2-205ENST00000409455 CST2P09228 141 aa13.2□□□□□ -0.3
LIMS2-205ENST00000409455 PTGDSP41222 190 aa13.2□□□□□ -0.3
LIMS2-205ENST00000409455 C1orf194Q5T5A4 169 aa13.2□□□□□ -0.3
LIMS2-205ENST00000409455 C6orf15Q6UXA7 325 aaPredicted RBP13.2□□□□□ -0.3
LIMS2-205ENST00000409455 PINX1Q96BK5 328 aaKnown RBP13.2□□□□□ -0.3
LIMS2-205ENST00000409455 OTOGLQ3ZCN5 2332 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 PIGBOS1A0A0B4J2F0 54 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 MARCH11A6NNE9 402 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 NPIPA2E9PIF3 369 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 NPIPA3F8WFD2 350 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 SOX15O60248 233 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 LCATP04180 440 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 FKBP2P26885 142 aaKnown RBP13.19□□□□□ -0.3
LIMS2-205ENST00000409455 S100GP29377 79 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 FUT6P51993 359 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 RPL23P62829 140 aaKnown RBP13.19□□□□□ -0.3
LIMS2-205ENST00000409455 HERPUD1Q15011 391 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 ZNF845Q96IR2 970 aaPredicted RBP13.19□□□□□ -0.3
LIMS2-205ENST00000409455 ZPBPQ9BS86 351 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 PARD6AQ9NPB6 346 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 FKBP11Q9NYL4 201 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 MED12Q93074 2177 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 IGKV1D-13A0A0B4J2D9 117 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 LRRC3CA6NJW4 275 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 TMEM210A6NLX4 147 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 IGKV1-13P0DP09 117 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 CRYGSP22914 178 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 HBG1P69891 147 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 HBG2P69892 147 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 CLEC12BQ2HXU8 276 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 DCAF10Q5QP82 559 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 Q6ZS49 121 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 CENPVQ7Z7K6 275 aaPredicted RBP13.19□□□□□ -0.3
LIMS2-205ENST00000409455 GBGT1Q8N5D6 347 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 EXTL1Q92935 676 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 LHX4Q969G2 390 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 THOC3Q96J01 351 aaKnown RBP13.19□□□□□ -0.3
LIMS2-205ENST00000409455 ZNF385AQ96PM9 386 aaKnown RBP13.19□□□□□ -0.3
LIMS2-205ENST00000409455 ELOVL1Q9BW60 279 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 ULBP2Q9BZM5 246 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 SPRY4Q9C004 299 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 CCL28Q9NRJ3 127 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 CBY1Q9Y3M2 126 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 AHCTF1Q8WYP5 2266 aa13.19□□□□□ -0.3
LIMS2-205ENST00000409455 KIR2DL5BA0A0G2JN68 375 aa13.18□□□□□ -0.3
LIMS2-205ENST00000409455 KIR2DL5BA0A0G2JPC4 375 aa13.18□□□□□ -0.3
LIMS2-205ENST00000409455 M0QZK8 103 aa13.18□□□□□ -0.3
LIMS2-205ENST00000409455 GGCTO75223 188 aaKnown RBP13.18□□□□□ -0.3
LIMS2-205ENST00000409455 ELLP55199 621 aaPredicted RBP13.18□□□□□ -0.3
LIMS2-205ENST00000409455 GNB2P62879 340 aa13.18□□□□□ -0.3
LIMS2-205ENST00000409455 PLCXD3Q63HM9 321 aa13.18□□□□□ -0.3
LIMS2-205ENST00000409455 TMEM42Q69YG0 159 aa13.18□□□□□ -0.3
LIMS2-205ENST00000409455 KIR2DL5AQ8N109 375 aa13.18□□□□□ -0.3
LIMS2-205ENST00000409455 CISD2Q8N5K1 135 aaKnown RBP13.18□□□□□ -0.3
LIMS2-205ENST00000409455 OR2T10Q8NGZ9 312 aa13.18□□□□□ -0.3
LIMS2-205ENST00000409455 CT55Q8WUE5 264 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms