RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 BORCS5Q969J3 196 aa16.76■□□□□ 0.27
VSX1-203ENST00000409285 NECAP2Q9NVZ3 263 aa16.76■□□□□ 0.27
VSX1-203ENST00000409285 GFOD1Q9NXC2 390 aa16.76■□□□□ 0.27
VSX1-203ENST00000409285 SDCBPO00560 298 aaPredicted RBP16.75■□□□□ 0.27
VSX1-203ENST00000409285 TOX4O94842 621 aa16.75■□□□□ 0.27
VSX1-203ENST00000409285 KLF9Q13886 244 aaPredicted RBP16.75■□□□□ 0.27
VSX1-203ENST00000409285 CDK10Q15131 360 aa16.75■□□□□ 0.27
VSX1-203ENST00000409285 IGSF11Q5DX21 431 aa16.75■□□□□ 0.27
VSX1-203ENST00000409285 TRIQKQ629K1 86 aa16.75■□□□□ 0.27
VSX1-203ENST00000409285 NCR3LG1Q68D85 454 aa16.75■□□□□ 0.27
VSX1-203ENST00000409285 OVCH2Q7RTZ1 564 aa16.75■□□□□ 0.27
VSX1-203ENST00000409285 VMO1Q7Z5L0 202 aa16.75■□□□□ 0.27
VSX1-203ENST00000409285 C8orf31Q8N9H6 132 aa16.75■□□□□ 0.27
VSX1-203ENST00000409285 TNFRSF14Q92956 283 aa16.75■□□□□ 0.27
VSX1-203ENST00000409285 UPRTQ96BW1 309 aa16.75■□□□□ 0.27
VSX1-203ENST00000409285 TMPRSS13Q9BYE2 586 aa16.75■□□□□ 0.27
VSX1-203ENST00000409285 TMEM133Q9H2Q1 129 aa16.75■□□□□ 0.27
VSX1-203ENST00000409285 OR2S2Q9NQN1 319 aa16.75■□□□□ 0.27
VSX1-203ENST00000409285 YPEL1O60688 119 aa16.74■□□□□ 0.27
VSX1-203ENST00000409285 HLA-DMAP28067 261 aa16.74■□□□□ 0.27
VSX1-203ENST00000409285 HRH1P35367 487 aa16.74■□□□□ 0.27
VSX1-203ENST00000409285 C5orf24Q7Z6I8 188 aa16.74■□□□□ 0.27
VSX1-203ENST00000409285 OR5H2Q8NGV7 314 aa16.74■□□□□ 0.27
VSX1-203ENST00000409285 OR10J5Q8NHC4 309 aa16.74■□□□□ 0.27
VSX1-203ENST00000409285 UBALD1Q8TB05 177 aa16.74■□□□□ 0.27
VSX1-203ENST00000409285 FAM216AQ8WUB2 273 aa16.74■□□□□ 0.27
VSX1-203ENST00000409285 YPEL2Q96QA6 119 aa16.74■□□□□ 0.27
VSX1-203ENST00000409285 TBX15Q96SF7 602 aa16.74■□□□□ 0.27
VSX1-203ENST00000409285 SLC23A1Q9UHI7 598 aa16.74■□□□□ 0.27
VSX1-203ENST00000409285 AUP1Q9Y679 476 aa16.74■□□□□ 0.27
VSX1-203ENST00000409285 ITGB1BP1O14713 200 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 CD3DP04234 171 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 FCER2P06734 321 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 DCTN2Q13561 401 aaKnown RBP16.73■□□□□ 0.27
VSX1-203ENST00000409285 DYRK1AQ13627 763 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 STEAP1BQ6NZ63 245 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 C16orf87Q6PH81 154 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 TOMM5Q8N4H5 51 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 C7orf69Q9H7B7 122 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 GNG12Q9UBI6 72 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 NSD1Q96L73 2696 aaPredicted RBP16.73■□□□□ 0.27
VSX1-203ENST00000409285 UPK1BO75841 260 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 RGS11O94810 467 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 AKAIN1P0CW23 69 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 OR5H8P0DN80 308 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 OR3A3P47888 321 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 MEF2DQ14814 521 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 MORN2Q502X0 79 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 RNASE10Q5GAN6 216 aaKnown RBP16.73■□□□□ 0.27
VSX1-203ENST00000409285 LURAP1LQ8IV03 231 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 H1FOOQ8IZA3 346 aaPredicted RBP16.73■□□□□ 0.27
VSX1-203ENST00000409285 ARRDC1Q8N5I2 433 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 HEXA-AS1Q9H8Q6 139 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 SIRT7Q9NRC8 400 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 OR1A1Q9P1Q5 309 aa16.73■□□□□ 0.27
VSX1-203ENST00000409285 MTORP42345 2549 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 BET1O15155 118 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 HSPA12AO43301 675 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 HOXB4P17483 251 aaPredicted RBP16.72■□□□□ 0.27
VSX1-203ENST00000409285 NFYBP25208 207 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 RFX2P48378 723 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 GNMTQ14749 295 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 ZNF660Q6AZW8 331 aaPredicted RBP16.72■□□□□ 0.27
VSX1-203ENST00000409285 HCP5Q6MZN7 132 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 FAHD2BQ6P2I3 314 aaPredicted RBP16.72■□□□□ 0.27
VSX1-203ENST00000409285 ZNF782Q6ZMW2 699 aaPredicted RBP16.72■□□□□ 0.27
VSX1-203ENST00000409285 ZNF439Q8NDP4 499 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 OR11H6Q8NGC7 330 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 OR52L2PQ8NGH6 319 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 OR13D1Q8NGV5 346 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 ZNF596Q8TC21 504 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 EDARADDQ8WWZ3 215 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 FAHD2AQ96GK7 314 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 GINS4Q9BRT9 223 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 PCGF1Q9BSM1 259 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 CLEC7AQ9BXN2 247 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 ABCB10Q9NRK6 738 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 EHFQ9NZC4 300 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 KCNS2Q9ULS6 477 aa16.72■□□□□ 0.27
VSX1-203ENST00000409285 IGHV2-26A0A0B4J1V2 119 aa16.71■□□□□ 0.27
VSX1-203ENST00000409285 TUSC2O75896 110 aa16.71■□□□□ 0.27
VSX1-203ENST00000409285 RAB3DO95716 219 aa16.71■□□□□ 0.27
VSX1-203ENST00000409285 PMP2P02689 132 aa16.71■□□□□ 0.27
VSX1-203ENST00000409285 FAUP35544 74 aaKnown RBP16.71■□□□□ 0.27
VSX1-203ENST00000409285 LTC4SQ16873 150 aa16.71■□□□□ 0.27
VSX1-203ENST00000409285 DHRS11Q6UWP2 260 aa16.71■□□□□ 0.27
VSX1-203ENST00000409285 LINC00311Q8N616 119 aa16.71■□□□□ 0.27
VSX1-203ENST00000409285 OR4C16Q8NGL9 310 aa16.71■□□□□ 0.27
VSX1-203ENST00000409285 ZFAND2BQ8WV99 257 aa16.71■□□□□ 0.27
VSX1-203ENST00000409285 IGHV3-43A0A0B4J1X8 118 aa16.7■□□□□ 0.26
VSX1-203ENST00000409285 RNASEK-C17orf49H0YIS7 233 aa16.7■□□□□ 0.26
VSX1-203ENST00000409285 IGHV3-43DP0DP04 118 aa16.7■□□□□ 0.26
VSX1-203ENST00000409285 PPP1CCP36873 323 aaKnown RBP16.7■□□□□ 0.26
VSX1-203ENST00000409285 CEACAM6P40199 344 aa16.7■□□□□ 0.26
VSX1-203ENST00000409285 INPP1P49441 399 aa16.7■□□□□ 0.26
VSX1-203ENST00000409285 BEND2Q8NDZ0 799 aa16.7■□□□□ 0.26
VSX1-203ENST00000409285 OR4D10Q8NGI6 311 aa16.7■□□□□ 0.26
VSX1-203ENST00000409285 OR9G1Q8NH87 305 aa16.7■□□□□ 0.26
VSX1-203ENST00000409285 GIMAP1Q8WWP7 306 aa16.7■□□□□ 0.26
VSX1-203ENST00000409285 C7orf50Q9BRJ6 194 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms