RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 CXorf65A6NEN9 183 aa15.61■□□□□ 0.09
PCDHA1-202ENST00000394633 C3orf80F5H4A9 247 aa15.61■□□□□ 0.09
PCDHA1-202ENST00000394633 NGFP01138 241 aa15.61■□□□□ 0.09
PCDHA1-202ENST00000394633 IGHEP01854 428 aa15.61■□□□□ 0.09
PCDHA1-202ENST00000394633 PSG2P11465 335 aa15.61■□□□□ 0.09
PCDHA1-202ENST00000394633 BCL2L14Q9BZR8 327 aa15.61■□□□□ 0.09
PCDHA1-202ENST00000394633 OR2W1Q9Y3N9 320 aa15.61■□□□□ 0.09
PCDHA1-202ENST00000394633 A0A1B0GU03 582 aa15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 SS18L1O75177 396 aaPredicted RBP15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 PYY3Q5JQD4 70 aa15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 FAM90A2PQ658T7 463 aa15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 Q6ZRM9 215 aa15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 APOBEC3DQ96AK3 386 aaPredicted RBP15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 GNG13Q9P2W3 67 aa15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 CHD3Q12873 2000 aaKnown RBP15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 HS3ST1O14792 307 aa15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 IFNA5P01569 189 aa15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 SLC25A6P12236 298 aa15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 HLA-DRB3P79483 266 aa15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 SLC25A24Q6NUK1 477 aa15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 SPNS3Q6ZMD2 512 aa15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 H1FOOQ8IZA3 346 aaPredicted RBP15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 OR5A2Q8NGI9 324 aa15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 OR10G4Q8NGN3 311 aa15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 GTF3AQ92664 365 aaKnown RBP15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 RDH5Q92781 318 aa15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 RSG1Q9BU20 258 aa15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 RIMS4Q9H426 269 aaPredicted RBP15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 ERRFI1Q9UJM3 462 aaPredicted RBP15.6■□□□□ 0.09
PCDHA1-202ENST00000394633 SPENQ96T58 3664 aaKnown RBP15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 TRBV6-6A0A0A6YYG2 114 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 TRAV24A0A0B4J272 114 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 TM4SF5O14894 197 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 HIST1H2BKO60814 126 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 HIST1H2BJP06899 126 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 HIST1H2BOP23527 126 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 HIST1H2BBP33778 126 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 CYB561P49447 251 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 HIST1H2BDP58876 126 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 HIST1H2BCP62807 126 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 SRYQ05066 204 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 HIST2H2BEQ16778 126 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 ZNF880Q6PDB4 577 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 OR10J5Q8NHC4 309 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 PSMF1Q92530 271 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 HIST1H2BHQ93079 126 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 RAB40CQ96S21 281 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 HIST1H2BNQ99877 126 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 HIST1H2BMQ99879 126 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 VSIRQ9H7M9 311 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 RPRMQ9NS64 109 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 MED13Q9UHV7 2174 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 CYB5BO43169 146 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 IGKV1-39P01597 117 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 IGKV1D-39P04432 117 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 SERPINE2P07093 398 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 COX5BP10606 129 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 S100GP29377 79 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 CD200P41217 278 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 TUSC5Q8IXB3 177 aa15.59■□□□□ 0.09
PCDHA1-202ENST00000394633 LILRA1O75019 489 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 ARL16Q0P5N6 197 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 LINC00596Q86U02 117 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 OR5P3Q8WZ94 311 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 CABLES2Q9BTV7 478 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 ZNF665Q9H7R5 613 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 IL17BQ9UHF5 180 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 DMRT1Q9Y5R6 373 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 ARHGAP21Q5T5U3 1957 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 CD300LBA8K4G0 201 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 CNOT4O95628 575 aaKnown RBP15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 TRGC2P03986 189 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 RAB11AP62491 216 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 ZNF726P1Q15940 193 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 SPINK14Q6IE38 97 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 CDPF1Q6NVV7 123 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 C17orf78Q8N4C9 275 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 RNASE11Q8TAA1 199 aaKnown RBP15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 HIST1H2AAQ96QV6 131 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 PLK3Q9H4B4 646 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 GAR1Q9NY12 217 aaKnown RBP15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 CISD1Q9NZ45 108 aaKnown RBP15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 OR1A1Q9P1Q5 309 aa15.58■□□□□ 0.08
PCDHA1-202ENST00000394633 BOD1L1Q8NFC6 3051 aa15.57■□□□□ 0.08
PCDHA1-202ENST00000394633 ZFP92A6NM28 416 aa15.57■□□□□ 0.08
PCDHA1-202ENST00000394633 B4DEV8 164 aa15.57■□□□□ 0.08
PCDHA1-202ENST00000394633 CELA3AP09093 270 aa15.57■□□□□ 0.08
PCDHA1-202ENST00000394633 S100A2P29034 98 aa15.57■□□□□ 0.08
PCDHA1-202ENST00000394633 LHX2P50458 406 aa15.57■□□□□ 0.08
PCDHA1-202ENST00000394633 OR2B11Q5JQS5 317 aa15.57■□□□□ 0.08
PCDHA1-202ENST00000394633 ZNF787Q6DD87 383 aa15.57■□□□□ 0.08
PCDHA1-202ENST00000394633 SSX7Q7RTT5 188 aa15.57■□□□□ 0.08
PCDHA1-202ENST00000394633 HAPLN4Q86UW8 402 aa15.57■□□□□ 0.08
PCDHA1-202ENST00000394633 OR10V1Q8NGI7 309 aa15.57■□□□□ 0.08
PCDHA1-202ENST00000394633 POM121L2Q96KW2 1035 aa15.57■□□□□ 0.08
PCDHA1-202ENST00000394633 RYDENQ9NUL5 291 aaKnown RBP15.57■□□□□ 0.08
PCDHA1-202ENST00000394633 DLL3Q9NYJ7 618 aa15.57■□□□□ 0.08
PCDHA1-202ENST00000394633 CACNG5Q9UF02 275 aa15.57■□□□□ 0.08
PCDHA1-202ENST00000394633 DMXL2Q8TDJ6 3036 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms