RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 NPBWR2P48146 333 aa7.09□□□□□ -1.28
CDC42SE1-201ENST00000357235 FGF8P55075 233 aaPredicted RBP7.09□□□□□ -1.28
CDC42SE1-201ENST00000357235 ICAM4Q14773 271 aa7.09□□□□□ -1.28
CDC42SE1-201ENST00000357235 OR51H1Q8NH63 302 aa7.09□□□□□ -1.28
CDC42SE1-201ENST00000357235 PAM16Q9Y3D7 125 aa7.09□□□□□ -1.28
CDC42SE1-201ENST00000357235 COL4A2P08572 1712 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 LOC105371242A0A075B767 164 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 C3orf80F5H4A9 247 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 IFNL4K9M1U5 179 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 M0QZ24 198 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 CHST1O43916 411 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZNF32P17041 273 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 MRPS34P82930 218 aaKnown RBP7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 TMEM183BQ1AE95 376 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZNF468Q5VIY5 522 aaPredicted RBP7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 SYT13Q7L8C5 426 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 GAPTQ8N292 157 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 TNFRSF14Q92956 283 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 SPSB1Q96BD6 273 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 PLEKHF2Q9H8W4 249 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 GPR35Q9HC97 309 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 PPIAL4AQ9Y536 164 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 PROB1E7EW31 1015 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 CCL3P10147 92 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 DTYMKP23919 212 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 LTBRP36941 435 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 NXPH1P58417 271 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 TMEM267Q0VDI3 215 aaPredicted RBP7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 MMDQ15546 238 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 HIST3H3Q16695 136 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 C17orf82Q86X59 251 aaPredicted RBP7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 CALHM1Q8IU99 346 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 NECAP1Q8NC96 275 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 TMEM170AQ8WVE7 144 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZCCHC14Q8WYQ9 949 aaKnown RBP7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 NABP1Q96AH0 204 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 RNF2Q99496 336 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 CHRNA10Q9GZZ6 450 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 TUBG2Q9NRH3 451 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 RARRES3Q9UL19 164 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 RNF24Q9Y225 148 aa7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 RBM7Q9Y580 266 aaKnown RBP7.08□□□□□ -1.28
CDC42SE1-201ENST00000357235 ESPL1Q14674 2120 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 DMDP11532 3685 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 NDUFS8O00217 210 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 NDUFB8O95169 186 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 IGLV3-19P01714 112 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 SCTP09683 121 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 CCL2P13500 99 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZNF16P17020 682 aaPredicted RBP7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZNF92Q03936 586 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 ACOT6Q3I5F7 207 aaPredicted RBP7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZNF506Q5JVG8 444 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 WDR25Q64LD2 544 aaPredicted RBP7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 SPSB3Q6PJ21 355 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 YRDCQ86U90 279 aaKnown RBP7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 MYPOPQ86VE0 399 aaPredicted RBP7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 IL22RA1Q8N6P7 574 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZNF611Q8N823 705 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 OR2D3Q8NGH3 330 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 IL1F10Q8WWZ1 152 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 MOB3AQ96BX8 217 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 RSG1Q9BU20 258 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 VAMP8Q9BV40 100 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 CTDSP1Q9GZU7 261 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 RBKSQ9H477 322 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZNF552Q9H707 407 aaPredicted RBP7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 FUT9Q9Y231 359 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 A0A1W2PR80 420 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 F6UZH7 168 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 HMGB3O15347 200 aaKnown RBP7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 PDCD6O75340 191 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 TMEM50AO95807 157 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 MMP9P14780 707 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 UBE2G2P60604 165 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 GNB2P62879 340 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 TDRG1Q3Y452 100 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZNF818PQ6ZRF7 136 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 STPG4Q8N801 248 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZNF738Q8NE65 137 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 OR4D5Q8NGN0 318 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 UBALD1Q8TB05 177 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 EML6Q6ZMW3 1958 aa7.07□□□□□ -1.28
CDC42SE1-201ENST00000357235 TRAV39A0A0B4J263 110 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 ETV2O00321 342 aaPredicted RBP7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 TRAPPC6AO75865 159 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 IL24Q13007 206 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 GUSBP11Q6P575 273 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 LINC01551Q86U37 167 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 OR8G5Q8NG78 346 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 OR1F12Q8NHA8 337 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 IL22RA2Q969J5 263 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 SPIN2AQ99865 258 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 SPIN2BQ9BPZ2 258 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 TMEM222Q9H0R3 208 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 ZNF665Q9H7R5 613 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 FSCN3Q9NQT6 498 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 CCL28Q9NRJ3 127 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 DECR2Q9NUI1 292 aa7.06□□□□□ -1.28
CDC42SE1-201ENST00000357235 IL36RNQ9UBH0 155 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms