RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 CA11O75493 328 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 ZNF154Q13106 437 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 OR11H7Q8NGC8 314 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 BARX1Q9HBU1 254 aaPredicted RBP11.75□□□□□ -0.53
SMC6-201ENST00000351948 WDR87Q6ZQQ6 2873 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 LY6G6EA0A0G2JKS1 128 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 ARG1P05089 322 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 CALHM1Q8IU99 346 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 C15orf54Q8N8G6 183 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 ZDHHC8Q9ULC8 765 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 U3KQA8 63 aa11.75□□□□□ -0.53
SMC6-201ENST00000351948 H0YL77 283 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 AKR1C3P42330 323 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 S100A12P80511 92 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 ARL16Q0P5N6 197 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 LFNGQ8NES3 379 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 BPIFCQ8NFQ6 507 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 OR13D1Q8NGV5 346 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 FGFBP3Q8TAT2 258 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 COL25A1Q9BXS0 654 aaPredicted RBP11.74□□□□□ -0.53
SMC6-201ENST00000351948 GAB2Q9UQC2 676 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 PHF3Q92576 2039 aaKnown RBP11.74□□□□□ -0.53
SMC6-201ENST00000351948 CADP27708 2225 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 COX5BP10606 129 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 HOXD11P31277 338 aaPredicted RBP11.74□□□□□ -0.53
SMC6-201ENST00000351948 PSG7Q13046 419 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 TBR1Q16650 682 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 ECSCRQ19T08 205 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 MRPL13Q9BYD1 178 aaKnown RBP11.74□□□□□ -0.53
SMC6-201ENST00000351948 PTPRQQ9UMZ3 2332 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 ZNF785A8K8V0 405 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 CRHP06850 196 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 FGF8P55075 233 aaPredicted RBP11.74□□□□□ -0.53
SMC6-201ENST00000351948 IL13RA2Q14627 380 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 SURF2Q15527 256 aaPredicted RBP11.74□□□□□ -0.53
SMC6-201ENST00000351948 DTD1Q8TEA8 209 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 SSMEM1Q8WWF3 244 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 ADTRPQ96IZ2 230 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 PRELID1Q9Y255 219 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 IGHV2OR16-5A0A0B4J2B6 119 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 ODAMA1E959 279 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 SNRPCP09234 159 aaKnown RBP11.74□□□□□ -0.53
SMC6-201ENST00000351948 PRSS54Q6PEW0 395 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 UNQ9370/PRO34162Q6UXP9 181 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 SPNS3Q6ZMD2 512 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 OR10A7Q8NGE5 316 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 BLNKQ8WV28 456 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 SAMD10Q9BYL1 202 aa11.74□□□□□ -0.53
SMC6-201ENST00000351948 SEBOXQ9HB31 216 aaPredicted RBP11.74□□□□□ -0.53
SMC6-201ENST00000351948 HEATR1Q9H583 2144 aaKnown RBP11.74□□□□□ -0.53
SMC6-201ENST00000351948 IGHV1-69-2A0A0G2JMI3 117 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 ZNF320A2RRD8 509 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 SSTR5P35346 364 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 KIAA0141Q14154 515 aaPredicted RBP11.73□□□□□ -0.53
SMC6-201ENST00000351948 MIDNQ504T8 468 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 TEX261Q6UWH6 196 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 PTX4Q96A99 478 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 U3KQ87 197 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.73□□□□□ -0.536e-8■■■■■ 29.9
SMC6-201ENST00000351948 A0A1W2PN81 502 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 K7N7A8 449 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 CHRNA7P36544 502 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 DYNLT3P51808 116 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 PRB3Q04118 309 aaPredicted RBP11.73□□□□□ -0.53
SMC6-201ENST00000351948 RASL11BQ9BPW5 248 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 SMIM7Q9BQ49 75 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 PIPOXQ9P0Z9 390 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 TIMM9Q9Y5J7 89 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 ZNF716A6NP11 495 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 VSIG10L2P0DP72 767 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 C1orf174Q8IYL3 243 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 ST6GAL2Q96JF0 529 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 IL36RNQ9UBH0 155 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 ACACBO00763 2458 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 CENPFP49454 3210 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 hCG_38984A0A1B0GV85 526 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 CT45A10P0DMU9 189 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 NQO2P16083 231 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 GLRXP35754 106 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 MPPED2Q15777 294 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 ABLIM2Q6H8Q1 611 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 LINC00596Q86U02 117 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 SPG11Q96JI7 2443 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 CST4P01036 141 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 CPN1P15169 458 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 KIR2DS2P43631 304 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 LYZP61626 148 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 ZNF385CQ66K41 422 aaPredicted RBP11.73□□□□□ -0.53
SMC6-201ENST00000351948 BVESQ8NE79 360 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 OR5P3Q8WZ94 311 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 VOPP1Q96AW1 172 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 DIRC2Q96SL1 478 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 POMT1Q9Y6A1 747 aa11.73□□□□□ -0.53
SMC6-201ENST00000351948 MBP02144 154 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 TFF1P04155 84 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 FANCMQ8IYD8 2048 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 Q96M66 194 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 NXF2Q9GZY0 626 aaKnown RBP11.72□□□□□ -0.53
SMC6-201ENST00000351948 Q9N2K0 584 aa11.72□□□□□ -0.53
SMC6-201ENST00000351948 C19orf12Q9NSK7 152 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms