RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 LOXL3P58215 753 aa12.56□□□□□ -0.4
PRPF3-201ENST00000324862 ACTBL2Q562R1 376 aa12.56□□□□□ -0.4
PRPF3-201ENST00000324862 Q96MF0 132 aa12.56□□□□□ -0.4
PRPF3-201ENST00000324862 C7orf50Q9BRJ6 194 aaKnown RBP12.56□□□□□ -0.4
PRPF3-201ENST00000324862 LOC105371242A0A075B767 164 aa12.55□□□□□ -0.4
PRPF3-201ENST00000324862 NPIPB11E5RHQ5 1161 aa12.55□□□□□ -0.4
PRPF3-201ENST00000324862 SPINT2O43291 252 aa12.55□□□□□ -0.4
PRPF3-201ENST00000324862 ZNF728P0DKX0 622 aa12.55□□□□□ -0.4
PRPF3-201ENST00000324862 DLX6P56179 175 aa12.55□□□□□ -0.4
PRPF3-201ENST00000324862 ARF6P62330 175 aa12.55□□□□□ -0.4
PRPF3-201ENST00000324862 MEF2CQ06413 473 aaPredicted RBP12.55□□□□□ -0.4
PRPF3-201ENST00000324862 DHRS11Q6UWP2 260 aa12.55□□□□□ -0.4
PRPF3-201ENST00000324862 LHFPL1Q86WI0 220 aa12.55□□□□□ -0.4
PRPF3-201ENST00000324862 CORO2AQ92828 525 aa12.55□□□□□ -0.4
PRPF3-201ENST00000324862 MBD6Q96DN6 1003 aa12.55□□□□□ -0.4
PRPF3-201ENST00000324862 DPAGT1Q9H3H5 408 aa12.55□□□□□ -0.4
PRPF3-201ENST00000324862 VSIG4Q9Y279 399 aa12.55□□□□□ -0.4
PRPF3-201ENST00000324862 ITPR3Q14573 2671 aa12.55□□□□□ -0.4
PRPF3-201ENST00000324862 A0A096LNT2 108 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 NAP1L6A6NFF2 107 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 PPYP01298 95 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 ZNF134P52741 427 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 LRRC75A-AS1Q8N1F1 130 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 ARRDC1Q8N5I2 433 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 TERB2Q8NHR7 220 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 C20orf85Q9H1P6 137 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 ONECUT1Q9UBC0 465 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 GNG12Q9UBI6 72 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 RNF150Q9ULK6 438 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 UBE2J1Q9Y385 318 aaPredicted RBP12.54□□□□□ -0.4
PRPF3-201ENST00000324862 ARPC1BO15143 372 aaKnown RBP12.54□□□□□ -0.4
PRPF3-201ENST00000324862 SLC31A2O15432 143 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 METTL11BQ5VVY1 283 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 H1FOOQ8IZA3 346 aaPredicted RBP12.54□□□□□ -0.4
PRPF3-201ENST00000324862 DUSP18Q8NEJ0 188 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 RBMXL1Q96E39 390 aaKnown RBP12.54□□□□□ -0.4
PRPF3-201ENST00000324862 PRRT1Q99946 306 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 FXYD6Q9H0Q3 95 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 NCOR1P1Q9H4R4 102 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 SCP2D1Q9UJQ7 156 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 WNK2Q9Y3S1 2297 aa12.54□□□□□ -0.4
PRPF3-201ENST00000324862 hCG_2014768A0A024R1R8 64 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 ZNF729A6NN14 1252 aaPredicted RBP12.53□□□□□ -0.4
PRPF3-201ENST00000324862 NDUFB6O95139 128 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 ANXA7P20073 488 aaKnown RBP12.53□□□□□ -0.4
PRPF3-201ENST00000324862 ZBTB25P24278 435 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 GNG10P50151 68 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 TMED4Q7Z7H5 227 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 LY6G5BQ8NDX9 201 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 NINJ1Q92982 152 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 SLC2A8Q9NY64 477 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 ZNF69Q9UC07 566 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 MGAT4AQ9UM21 535 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 TRBV23-1A0A0A0MS06 115 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 F2RL2O00254 374 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 OR8U9P0C7N5 309 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 USF1P22415 310 aaPredicted RBP12.53□□□□□ -0.4
PRPF3-201ENST00000324862 FPR2P25090 351 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 DSCR9P59020 149 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 PAX2Q02962 417 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 RBMS2Q15434 407 aaKnown RBP12.53□□□□□ -0.4
PRPF3-201ENST00000324862 PLET1Q6UQ28 207 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 PDZD9Q8IXQ8 264 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 ADAD2Q8NCV1 583 aaKnown RBP12.53□□□□□ -0.4
PRPF3-201ENST00000324862 OR8U1Q8NH10 309 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 SECTM1Q8WVN6 248 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 CAPSLQ8WWF8 208 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 GIMAP1Q8WWP7 306 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 SIRT7Q9NRC8 400 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 IDI2-AS1Q9NZ38 188 aa12.53□□□□□ -0.4
PRPF3-201ENST00000324862 A0A0B4J293 547 aa12.52□□□□□ -0.4
PRPF3-201ENST00000324862 ST8SIA5O15466 376 aa12.52□□□□□ -0.4
PRPF3-201ENST00000324862 TUSC2O75896 110 aa12.52□□□□□ -0.4
PRPF3-201ENST00000324862 RLN1P04808 185 aa12.52□□□□□ -0.4
PRPF3-201ENST00000324862 MORN2Q502X0 79 aa12.52□□□□□ -0.4
PRPF3-201ENST00000324862 CIARTQ8N365 385 aaPredicted RBP12.52□□□□□ -0.4
PRPF3-201ENST00000324862 Q8N7P7 452 aa12.52□□□□□ -0.4
PRPF3-201ENST00000324862 DEDD2Q8WXF8 326 aa12.52□□□□□ -0.4
PRPF3-201ENST00000324862 DACT3Q96B18 629 aaPredicted RBP12.52□□□□□ -0.4
PRPF3-201ENST00000324862 TAS2R3Q9NYW6 316 aa12.52□□□□□ -0.4
PRPF3-201ENST00000324862 OTOGQ6ZRI0 2925 aa12.52□□□□□ -0.4
PRPF3-201ENST00000324862 POM121CA8CG34 1229 aa12.52□□□□□ -0.41
PRPF3-201ENST00000324862 GPR37O15354 613 aa12.52□□□□□ -0.41
PRPF3-201ENST00000324862 C8orf46Q8TAG6 207 aa12.52□□□□□ -0.41
PRPF3-201ENST00000324862 RAB39BQ96DA2 213 aa12.52□□□□□ -0.41
PRPF3-201ENST00000324862 ABHD14BQ96IU4 210 aa12.52□□□□□ -0.41
PRPF3-201ENST00000324862 SUCNR1Q9BXA5 334 aa12.52□□□□□ -0.41
PRPF3-201ENST00000324862 GAL3ST2Q9H3Q3 398 aa12.52□□□□□ -0.41
PRPF3-201ENST00000324862 C5orf66Q9H5L9 145 aa12.52□□□□□ -0.41
PRPF3-201ENST00000324862 GFOD1Q9NXC2 390 aa12.52□□□□□ -0.41
PRPF3-201ENST00000324862 ITGB1BP2Q9UKP3 347 aa12.52□□□□□ -0.41
PRPF3-201ENST00000324862 SETXQ7Z333 2677 aaKnown RBP12.52□□□□□ -0.41
PRPF3-201ENST00000324862 CTXN2P0C2S0 81 aa12.51□□□□□ -0.41
PRPF3-201ENST00000324862 LINC00205P59089 165 aa12.51□□□□□ -0.41
PRPF3-201ENST00000324862 HTD2P86397 168 aa12.51□□□□□ -0.41
PRPF3-201ENST00000324862 TRAT1Q6PIZ9 186 aa12.51□□□□□ -0.41
PRPF3-201ENST00000324862 HEPN1Q6WQI6 88 aa12.51□□□□□ -0.41
PRPF3-201ENST00000324862 MOB3AQ96BX8 217 aa12.51□□□□□ -0.41
PRPF3-201ENST00000324862 LINC00574Q9H8X3 128 aa12.51□□□□□ -0.41
PRPF3-201ENST00000324862 CCL28Q9NRJ3 127 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms