RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 YPEL4Q96NS1 127 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 WFIKKN1Q96NZ8 548 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 ATP23Q9Y6H3 246 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 MAP1LC3B2A6NCE7 125 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 ZNF503-AS2A6NEH8 195 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 IDH3GP51553 393 aaPredicted RBP10.57□□□□□ -0.72
CHMP3-201ENST00000263856 B3GALT5-AS1P59052 145 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 HIST3H2BBQ8N257 126 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 OR2Y1Q8NGV0 311 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 RCC1LQ96I51 464 aaKnown RBP10.57□□□□□ -0.72
CHMP3-201ENST00000263856 MAP1LC3BQ9GZQ8 125 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 C11orf1Q9H5F2 150 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 SLC39A9Q9NUM3 307 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 TREM2Q9NZC2 230 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 IL36GQ9NZH8 169 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 A0A1W2PPQ1 181 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 SYNGR2O43760 224 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 LMO1P25800 156 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 FAM90A2PQ658T7 463 aa10.57□□□□□ -0.72
CHMP3-201ENST00000263856 H0Y980 276 aa10.56□□□□□ -0.72
CHMP3-201ENST00000263856 HOXA4Q00056 320 aaPredicted RBP10.56□□□□□ -0.72
CHMP3-201ENST00000263856 Q6ZSR3 168 aa10.56□□□□□ -0.72
CHMP3-201ENST00000263856 SLC35E3Q7Z769 313 aa10.56□□□□□ -0.72
CHMP3-201ENST00000263856 OR5D13Q8NGL4 314 aa10.56□□□□□ -0.72
CHMP3-201ENST00000263856 SMDT1Q9H4I9 107 aa10.56□□□□□ -0.72
CHMP3-201ENST00000263856 OR2W1Q9Y3N9 320 aa10.56□□□□□ -0.72
CHMP3-201ENST00000263856 KRASP01116 189 aa10.56□□□□□ -0.72
CHMP3-201ENST00000263856 MMP7P09237 267 aaPredicted RBP10.56□□□□□ -0.72
CHMP3-201ENST00000263856 ZNF816Q0VGE8 651 aaPredicted RBP10.56□□□□□ -0.72
CHMP3-201ENST00000263856 ZNF726P1Q15940 193 aa10.56□□□□□ -0.72
CHMP3-201ENST00000263856 ADGRG7Q96K78 797 aa10.56□□□□□ -0.72
CHMP3-201ENST00000263856 A0A1B0GW64 132 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 ANKRD30BLA7E2S9 258 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 DEGS1O15121 323 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 ZNF737O75373 536 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 NAPSAO96009 420 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 CYB561P49447 251 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 FOXO1Q12778 655 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 NCR3LG1Q68D85 454 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 FAM53AQ6NSI3 398 aaPredicted RBP10.55□□□□□ -0.72
CHMP3-201ENST00000263856 OR10V1Q8NGI7 309 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 M1APQ8TC57 530 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 MRPL30Q8TCC3 161 aaKnown RBP10.55□□□□□ -0.72
CHMP3-201ENST00000263856 GATAD1Q8WUU5 269 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 KCNE4Q8WWG9 221 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 PLPPR2Q96GM1 343 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 WDR54Q9H977 334 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 PLSCR2Q9NRY7 297 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 ZNF391Q9UJN7 358 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 RNF115Q9Y4L5 304 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 A0A087X0M5 115 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 LOC102723996A0A087X1L8 192 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 A0A1B0GX30 115 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 CEBPDP49716 269 aaPredicted RBP10.55□□□□□ -0.72
CHMP3-201ENST00000263856 LINC00696Q6ZRV3 163 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 C16orf82Q7Z2V1 217 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 CXorf67Q86X51 503 aaPredicted RBP10.55□□□□□ -0.72
CHMP3-201ENST00000263856 TMEM37Q8WXS4 190 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 OR4C12Q96R67 309 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 C1QTNF5Q9BXJ0 243 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 SIRT7Q9NRC8 400 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 A0A087WWC5 75 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 LRRC3CA6NJW4 275 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 TSTD3H0UI37 97 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 SOX15O60248 233 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 FGF5P12034 268 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 MDH2P40926 338 aaKnown RBP10.55□□□□□ -0.72
CHMP3-201ENST00000263856 PLP2Q04941 152 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 Q0VFX4 171 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 CEACAM21Q3KPI0 293 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 FAM58AQ8N1B3 248 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 OR4F5Q8NH21 305 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 POM121Q96HA1 1249 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 OR4F4Q96R69 305 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 OPA3Q9H6K4 179 aa10.55□□□□□ -0.72
CHMP3-201ENST00000263856 ICE1Q9Y2F5 2266 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 ASPMQ8IZT6 3477 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 CLEC18AA5D8T8 446 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 PTBP3O95758 552 aaKnown RBP10.54□□□□□ -0.72
CHMP3-201ENST00000263856 CYB5R3P00387 301 aaPredicted RBP10.54□□□□□ -0.72
CHMP3-201ENST00000263856 EGR1P18146 543 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 IL11RAQ14626 422 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 LTC4SQ16873 150 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.54□□□□□ -0.72
CHMP3-201ENST00000263856 LRP11Q86VZ4 500 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 MCEMP1Q8IX19 187 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 H1FOOQ8IZA3 346 aaPredicted RBP10.54□□□□□ -0.72
CHMP3-201ENST00000263856 CLEC18CQ8NCF0 446 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 MAFAQ8NHW3 353 aaPredicted RBP10.54□□□□□ -0.72
CHMP3-201ENST00000263856 ELOVL1Q9BW60 279 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 PRDM13Q9H4Q3 707 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 MAP1BP46821 2468 aaKnown RBP10.54□□□□□ -0.72
CHMP3-201ENST00000263856 A0A0U1RQK1 487 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 KIAA1324LA8MWY0 1029 aaPredicted RBP10.54□□□□□ -0.72
CHMP3-201ENST00000263856 GATCO43716 136 aaKnown RBP10.54□□□□□ -0.72
CHMP3-201ENST00000263856 HBG1P69891 147 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 HBG2P69892 147 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 PCSK4Q6UW60 755 aa10.54□□□□□ -0.72
CHMP3-201ENST00000263856 THOC3Q96J01 351 aaKnown RBP10.54□□□□□ -0.72
CHMP3-201ENST00000263856 RAB40CQ96S21 281 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms