RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 LUMP51884 338 aaPredicted RBP12.44□□□□□ -0.42
CCDC47-201ENST00000225726 SP6Q3SY56 376 aa12.44□□□□□ -0.42
CCDC47-201ENST00000225726 STUMQ69YW2 141 aa12.44□□□□□ -0.42
CCDC47-201ENST00000225726 CMTM1Q8IZ96 169 aa12.44□□□□□ -0.42
CCDC47-201ENST00000225726 LGI3Q8N145 548 aa12.44□□□□□ -0.42
CCDC47-201ENST00000225726 OR1L1Q8NH94 360 aa12.44□□□□□ -0.42
CCDC47-201ENST00000225726 GALMQ96C23 342 aa12.44□□□□□ -0.42
CCDC47-201ENST00000225726 ZZEF1O43149 2961 aa12.44□□□□□ -0.42
CCDC47-201ENST00000225726 LRRC30A6NM36 301 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 PHF1O43189 567 aaPredicted RBP12.43□□□□□ -0.42
CCDC47-201ENST00000225726 S100GP29377 79 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 RAB14P61106 215 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 TFF3Q07654 80 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 TEX36Q5VZQ5 186 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 ZNF561Q8N587 486 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 MRGPRDQ8TDS7 321 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 MSI2Q96DH6 328 aaKnown RBP12.43□□□□□ -0.42
CCDC47-201ENST00000225726 OR10C1Q96KK4 312 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 SPTA1P02549 2419 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 K7N7A8 449 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 SHOXO15266 292 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 HBZP02008 142 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 PSMB6P28072 239 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 SRPXP78539 464 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 LRRC37A5PQ49AS3 106 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 FAM201AQ5SY85 155 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 BVESQ8NE79 360 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 UBALD1Q8TB05 177 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 GLYATL2Q8WU03 294 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 SDSLQ96GA7 329 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 C18orf12Q96KH6 178 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 HEXA-AS1Q9H8Q6 139 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 DYNLRB1Q9NP97 96 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 MPTX1A8MV57 137 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 B9A039 149 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 MPC2O95563 127 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 MUC1P15941 1255 aaPredicted RBP12.43□□□□□ -0.42
CCDC47-201ENST00000225726 IL2RGP31785 369 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 CEACAM6P40199 344 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 OPCMLQ14982 345 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 ZNF546Q86UE3 836 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 OR13A1Q8NGR1 328 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 THAP6Q8TBB0 222 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 TP53RKQ96S44 253 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 TOLLIPQ9H0E2 274 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 SAP30LQ9HAJ7 183 aa12.43□□□□□ -0.42
CCDC47-201ENST00000225726 SIAH2O43255 324 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 EDDM3AQ14507 147 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 C4orf17Q53FE4 359 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 GGNBP1Q5YKI7 109 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 OR5D13Q8NGL4 314 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 NCOR1P1Q9H4R4 102 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 MLXQ9UH92 298 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 PLCE1Q9P212 2302 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 LY86O95711 162 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 PLAUP00749 431 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 TMUB2Q71RG4 321 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 ZNF767PQ75MW2 155 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 TPRX1Q8N7U7 411 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 MFFQ9GZY8 342 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 TMEM222Q9H0R3 208 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 MS4A5Q9H3V2 200 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 S100A11P31949 105 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 TUSC1Q2TAM9 212 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 MST1LQ2TV78 715 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 AKR1E2Q96JD6 320 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 TNFSF18Q9UNG2 199 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 MAB21L2Q9Y586 359 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 DYSFO75923 2080 aa12.42□□□□□ -0.42
CCDC47-201ENST00000225726 ODAMA1E959 279 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 ATRXP46100 2492 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 IL15RAQ13261 267 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 AANATQ16613 207 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 TMEM88Q6PEY1 159 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 ZCCHC24Q8N2G6 241 aaKnown RBP12.41□□□□□ -0.42
CCDC47-201ENST00000225726 ZNRF1Q8ND25 227 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 GAFA1Q96PS6 74 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 CISD1Q9NZ45 108 aaKnown RBP12.41□□□□□ -0.42
CCDC47-201ENST00000225726 PGLYRP1O75594 196 aaPredicted RBP12.41□□□□□ -0.42
CCDC47-201ENST00000225726 WNT2P09544 360 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 LOXP28300 417 aaPredicted RBP12.41□□□□□ -0.42
CCDC47-201ENST00000225726 IAH1Q2TAA2 248 aaPredicted RBP12.41□□□□□ -0.42
CCDC47-201ENST00000225726 CR1LQ2VPA4 569 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 ZNF672Q499Z4 452 aaPredicted RBP12.41□□□□□ -0.42
CCDC47-201ENST00000225726 TGIF2LYQ8IUE0 185 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 C1orf87Q8N0U7 546 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 ZNF808Q8N4W9 903 aaPredicted RBP12.41□□□□□ -0.42
CCDC47-201ENST00000225726 ZNF665Q9H7R5 613 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 MBD2Q9UBB5 411 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 UBE2J1Q9Y385 318 aaPredicted RBP12.41□□□□□ -0.42
CCDC47-201ENST00000225726 DEFB108AA8MXU0 73 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 SPINT2O43291 252 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 ARL11Q969Q4 196 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 TMEM56Q96MV1 263 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 TMEM204Q9BSN7 226 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 TMEM56-RWDD3S4R434 201 aa12.41□□□□□ -0.42
CCDC47-201ENST00000225726 H0Y980 276 aa12.4□□□□□ -0.42
CCDC47-201ENST00000225726 C15orf65H3BRN8 121 aa12.4□□□□□ -0.42
CCDC47-201ENST00000225726 GZMHP20718 246 aa12.4□□□□□ -0.42
CCDC47-201ENST00000225726 ZNF680Q8NEM1 530 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms