RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	CRIM1	Q9NZV1	1036 aa		12.41	□□□□□ -0.42
SMTN-223	ENST00000619644	PITPNC1	Q9UKF7	332 aa		12.41	□□□□□ -0.42
SMTN-223	ENST00000619644	ZNF716	A6NP11	495 aa		12.41	□□□□□ -0.42
SMTN-223	ENST00000619644	ARF1	P84077	181 aa	Known RBP	12.41	□□□□□ -0.42
SMTN-223	ENST00000619644	TMEM267	Q0VDI3	215 aa	Predicted RBP	12.41	□□□□□ -0.42
SMTN-223	ENST00000619644	PRDX4	Q13162	271 aa		12.41	□□□□□ -0.42
SMTN-223	ENST00000619644	WDR5B	Q86VZ2	330 aa		12.41	□□□□□ -0.42
SMTN-223	ENST00000619644	C17orf78	Q8N4C9	275 aa		12.41	□□□□□ -0.42
SMTN-223	ENST00000619644	RCC1L	Q96I51	464 aa	Known RBP	12.41	□□□□□ -0.42
SMTN-223	ENST00000619644	HIST1H2AA	Q96QV6	131 aa		12.41	□□□□□ -0.42
SMTN-223	ENST00000619644	SPIN2A	Q99865	258 aa		12.41	□□□□□ -0.42
SMTN-223	ENST00000619644	SPIN2B	Q9BPZ2	258 aa		12.41	□□□□□ -0.42
SMTN-223	ENST00000619644	SF3B5	Q9BWJ5	86 aa	Known RBP	12.41	□□□□□ -0.42
SMTN-223	ENST00000619644	PLEKHF2	Q9H8W4	249 aa		12.41	□□□□□ -0.42
SMTN-223	ENST00000619644	TRAPPC2L	H3BP13	241 aa		12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	CYTIP	O60759	359 aa		12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	CNOT4	O95628	575 aa	Known RBP	12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	FGF5	P12034	268 aa		12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	SRD5A2	P31213	254 aa		12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	CD200	P41217	278 aa		12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	FOXG1	P55316	489 aa	Predicted RBP	12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	TMEM211	Q6ICI0	200 aa		12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	MYPOP	Q86VE0	399 aa	Predicted RBP	12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	CMTM1	Q8IZ96	169 aa		12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	IL22RA1	Q8N6P7	574 aa		12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	MAFA	Q8NHW3	353 aa	Predicted RBP	12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	GPR87	Q9BY21	358 aa		12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	GLRX2	Q9NS18	164 aa		12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	LOC102723996	A0A087X1L8	192 aa		12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	ZFP92	A6NM28	416 aa		12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	DVL1	O14640	695 aa		12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	EREG	O14944	169 aa		12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	SP5	Q6BEB4	398 aa	Predicted RBP	12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	GGN	Q86UU5	652 aa		12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	THNSL2	Q86YJ6	484 aa		12.4	□□□□□ -0.42
SMTN-223	ENST00000619644	NOL4L	Q96MY1	436 aa	Predicted RBP	12.4	□□□□□ -0.42
SMTN-223	ENST00000619644		B4DEV8	164 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	APLNR	P35414	380 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	CYB5R2	Q6BCY4	276 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	TMEM183A	Q8IXX5	376 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	ZNF100	Q8IYN0	542 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	SELENOH	Q8IZQ5	122 aa	Known RBP	12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	ATG101	Q9BSB4	218 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	GNG13	Q9P2W3	67 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644		A0A1B0GWJ7	208 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	FAM166B	A8MTA8	275 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	PROB1	E7EW31	1015 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	CLDN34	H7C241	214 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	AMBP	P02760	352 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	SERPINE2	P07093	398 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	IAPP	P10997	89 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	RND2	P52198	227 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	RAB11A	P62491	216 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	RAB24	Q969Q5	203 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	SGCZ	Q96LD1	299 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	DDA1	Q9BW61	102 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	C11orf1	Q9H5F2	150 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	DEPP	Q9NTK1	212 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	TGOLN2	O43493	480 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	SYNGR1	O43759	233 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	NGF	P01138	241 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	SPATA46	Q5T0L3	261 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	MKX	Q8IYA7	352 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	RBMXL1	Q96E39	390 aa	Known RBP	12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	OR14J1	Q9UGF5	321 aa		12.39	□□□□□ -0.43
SMTN-223	ENST00000619644	GPR179	Q6PRD1	2367 aa		12.38	□□□□□ -0.43
SMTN-223	ENST00000619644	SLC22A20	A6NK97	555 aa		12.38	□□□□□ -0.43
SMTN-223	ENST00000619644	ZNF705G	A8MUZ8	300 aa	Predicted RBP	12.38	□□□□□ -0.43
SMTN-223	ENST00000619644	CDS2	O95674	445 aa		12.38	□□□□□ -0.43
SMTN-223	ENST00000619644	B3GALT5-AS1	P59052	145 aa		12.38	□□□□□ -0.43
SMTN-223	ENST00000619644	ZNF880	Q6PDB4	577 aa		12.38	□□□□□ -0.43
SMTN-223	ENST00000619644	LCN15	Q6UWW0	184 aa		12.38	□□□□□ -0.43
SMTN-223	ENST00000619644	KCNS2	Q9ULS6	477 aa		12.38	□□□□□ -0.43
SMTN-223	ENST00000619644		A0A1B0GU03	582 aa		12.38	□□□□□ -0.43
SMTN-223	ENST00000619644	PINLYP	A6NC86	204 aa		12.38	□□□□□ -0.43
SMTN-223	ENST00000619644	TMEM50A	O95807	157 aa		12.38	□□□□□ -0.43
SMTN-223	ENST00000619644	COX5B	P10606	129 aa		12.38	□□□□□ -0.43
SMTN-223	ENST00000619644	CYB561	P49447	251 aa		12.38	□□□□□ -0.43
SMTN-223	ENST00000619644	SRPX	P78539	464 aa		12.38	□□□□□ -0.43
SMTN-223	ENST00000619644	FAM90A2P	Q658T7	463 aa		12.38	□□□□□ -0.43
SMTN-223	ENST00000619644	PSMF1	Q92530	271 aa		12.38	□□□□□ -0.43
SMTN-223	ENST00000619644	LOC102723971	A0A1B0GUV8	181 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	IL18BP	O95998	194 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	CYB5R3	P00387	301 aa	Predicted RBP	12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	G0S2	P27469	103 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	FGF8	P55075	233 aa	Predicted RBP	12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	C3AR1	Q16581	482 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	TMEM42	Q69YG0	159 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	TUSC5	Q8IXB3	177 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	BEND2	Q8NDZ0	799 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	OR4X1	Q8NH49	305 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	RNASEH2C	Q8TDP1	164 aa	Known RBP	12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	KCNE4	Q8WWG9	221 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	CABLES2	Q9BTV7	478 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	ERRFI1	Q9UJM3	462 aa	Predicted RBP	12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	CELA3A	P09093	270 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	TLE4	Q04727	773 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	ZDHHC23	Q8IYP9	409 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	HES7	Q9BYE0	225 aa		12.37	□□□□□ -0.43
SMTN-223	ENST00000619644	ZNF552	Q9H707	407 aa	Predicted RBP	12.37	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms