RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 TRAPPC2P0DI81 140 aa21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 TRAPPC2BP0DI82 140 aa21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 PI3P19957 117 aa21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 SSTR5P35346 364 aa21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 RRAS2P62070 204 aaPredicted RBP21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 ZNF626Q68DY1 528 aa21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 H1FOOQ8IZA3 346 aaPredicted RBP21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 TMEM230Q96A57 120 aa21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 C14orf79Q96F83 325 aa21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 SLC25A10Q9UBX3 287 aaPredicted RBP21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 SLC23A1Q9UHI7 598 aa21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 OPN4Q9UHM6 478 aa21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 HEXAP06865 529 aa21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 UCP3P55916 312 aa21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 FXYD4P59646 89 aa21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 FAHD2BQ6P2I3 314 aaPredicted RBP21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 TOMM40LQ969M1 308 aa21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 DACT3Q96B18 629 aaPredicted RBP21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 FAHD2AQ96GK7 314 aa21.59■■□□□ 1.05
SCAMP4-210ENST00000588555 ZNF728P0DKX0 622 aa21.58■■□□□ 1.04
SCAMP4-210ENST00000588555 CGB3P0DN86 165 aa21.58■■□□□ 1.04
SCAMP4-210ENST00000588555 CGB7P0DN87 165 aa21.58■■□□□ 1.04
SCAMP4-210ENST00000588555 PGAM2P15259 253 aa21.58■■□□□ 1.04
SCAMP4-210ENST00000588555 GZMHP20718 246 aa21.58■■□□□ 1.04
SCAMP4-210ENST00000588555 C4orf46Q504U0 113 aa21.58■■□□□ 1.04
SCAMP4-210ENST00000588555 TCF23Q7RTU1 214 aa21.58■■□□□ 1.04
SCAMP4-210ENST00000588555 ZNF565Q8N9K5 539 aa21.58■■□□□ 1.04
SCAMP4-210ENST00000588555 GALMQ96C23 342 aa21.58■■□□□ 1.04
SCAMP4-210ENST00000588555 CHODLQ9H9P2 273 aa21.58■■□□□ 1.04
SCAMP4-210ENST00000588555 GPN1Q9HCN4 374 aaPredicted RBP21.58■■□□□ 1.04
SCAMP4-210ENST00000588555 OR6C3Q9NZP0 311 aa21.58■■□□□ 1.04
SCAMP4-210ENST00000588555 CREBL2O60519 120 aaPredicted RBP21.57■■□□□ 1.04
SCAMP4-210ENST00000588555 CTSDP07339 412 aaPredicted RBP21.57■■□□□ 1.04
SCAMP4-210ENST00000588555 EFNA4P52798 201 aa21.57■■□□□ 1.04
SCAMP4-210ENST00000588555 HERV-K104P61576 105 aa21.57■■□□□ 1.04
SCAMP4-210ENST00000588555 CD300CQ08708 224 aa21.57■■□□□ 1.04
SCAMP4-210ENST00000588555 ARL11Q969Q4 196 aa21.57■■□□□ 1.04
SCAMP4-210ENST00000588555 ZBTB25P24278 435 aa21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 DHODHQ02127 395 aa21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 DHRS2Q13268 280 aa21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 PPP1R1AQ13522 171 aa21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 AVPI1Q5T686 147 aa21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 LDLRAD3Q86YD5 345 aa21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 MUC20Q8N307 709 aaPredicted RBP21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 IGKV1D-13A0A0B4J2D9 117 aa21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 IGKV1-13P0DP09 117 aa21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 AKR1C4P17516 323 aa21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 NDUFB7P17568 137 aa21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 IL2RGP31785 369 aa21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 TAS2R31P59538 309 aa21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 UBE2MP61081 183 aaKnown RBP21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 TMEM128Q5BJH2 165 aa21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 ZNF295-AS1Q8N0V1 137 aa21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 ZFAND1Q8TCF1 268 aa21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 ZNF431Q8TF32 576 aaPredicted RBP21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 ZNF69Q9UC07 566 aa21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 OR2W1Q9Y3N9 320 aa21.56■■□□□ 1.04
SCAMP4-210ENST00000588555 CENPEQ02224 2701 aa21.55■■□□□ 1.04
SCAMP4-210ENST00000588555 FAM172BPA6NC97 362 aa21.55■■□□□ 1.04
SCAMP4-210ENST00000588555 DVL1O14640 695 aa21.55■■□□□ 1.04
SCAMP4-210ENST00000588555 NDUFB3O43676 98 aa21.55■■□□□ 1.04
SCAMP4-210ENST00000588555 LRRC10Q5BKY1 277 aa21.55■■□□□ 1.04
SCAMP4-210ENST00000588555 CD276Q5ZPR3 534 aa21.55■■□□□ 1.04
SCAMP4-210ENST00000588555 AKAP14Q86UN6 197 aa21.55■■□□□ 1.04
SCAMP4-210ENST00000588555 RSRP1Q9BUV0 290 aa21.55■■□□□ 1.04
SCAMP4-210ENST00000588555 TOLLIPQ9H0E2 274 aa21.55■■□□□ 1.04
SCAMP4-210ENST00000588555 MED28Q9H204 178 aa21.55■■□□□ 1.04
SCAMP4-210ENST00000588555 SPINT2O43291 252 aa21.54■■□□□ 1.04
SCAMP4-210ENST00000588555 TMEM33P57088 247 aa21.54■■□□□ 1.04
SCAMP4-210ENST00000588555 FCN2Q15485 313 aa21.54■■□□□ 1.04
SCAMP4-210ENST00000588555 SLC38A6Q8IZM9 456 aa21.54■■□□□ 1.04
SCAMP4-210ENST00000588555 RFESDQ8TAC1 157 aa21.54■■□□□ 1.04
SCAMP4-210ENST00000588555 CORO2AQ92828 525 aa21.54■■□□□ 1.04
SCAMP4-210ENST00000588555 RAB1CQ92928 201 aa21.54■■□□□ 1.04
SCAMP4-210ENST00000588555 PARP12Q9H0J9 701 aaKnown RBP21.54■■□□□ 1.04
SCAMP4-210ENST00000588555 RDH8Q9NYR8 311 aa21.54■■□□□ 1.04
SCAMP4-210ENST00000588555 C14orf166Q9Y224 244 aaKnown RBP21.54■■□□□ 1.04
SCAMP4-210ENST00000588555 FBN2P35556 2912 aa21.54■■□□□ 1.04
SCAMP4-210ENST00000588555 HSPA12AO43301 675 aa21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 PPIHO43447 177 aaKnown RBP21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 HLA-AP01891 365 aaKnown RBP21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 RPS2P15880 293 aaKnown RBP21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 SUPT4H1P63272 117 aaKnown RBP21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 HTD2P86397 168 aa21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 C17orf58Q2M2W7 97 aa21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 LYG2Q86SG7 212 aa21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 OR52L2PQ8NGH6 319 aa21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 TIMD4Q96H15 378 aa21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 CALYQ9NYX4 217 aa21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 TRGV10A0A0A0MS01 117 aa21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 C9orf170A2RU37 121 aa21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 SSNA1O43805 119 aa21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 GNRHRP30968 328 aa21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 CEACAM6P40199 344 aa21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 GNMTQ14749 295 aa21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 TMEM155Q4W5P6 130 aa21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 FAM53AQ6NSI3 398 aaPredicted RBP21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 ZNF841Q6ZN19 808 aa21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 CCL19Q99731 98 aa21.53■■□□□ 1.04
SCAMP4-210ENST00000588555 C19orf12Q9NSK7 152 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms