RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 OR8H3Q8N146 312 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 C5orf56Q8N8D9 126 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 OR4X2Q8NGF9 303 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 OR1L1Q8NH94 360 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 TFAP2CQ92754 450 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 TMED9Q9BVK6 235 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 KCNK15Q9H427 330 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 FKBP14Q9NWM8 211 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 GFOD1Q9NXC2 390 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 RCC2Q9P258 522 aaKnown RBP10.91□□□□□ -0.66
RAB40B-204ENST00000571554 ERGIC3Q9Y282 383 aa10.91□□□□□ -0.66
RAB40B-204ENST00000571554 PSMB11A5LHX3 300 aa10.9□□□□□ -0.66
RAB40B-204ENST00000571554 M0QZK8 103 aa10.9□□□□□ -0.66
RAB40B-204ENST00000571554 PF4P02776 101 aa10.9□□□□□ -0.66
RAB40B-204ENST00000571554 CDK1P06493 297 aa10.9□□□□□ -0.66
RAB40B-204ENST00000571554 RCC1P18754 421 aaPredicted RBP10.9□□□□□ -0.66
RAB40B-204ENST00000571554 NKAPLQ5M9Q1 402 aa10.9□□□□□ -0.66
RAB40B-204ENST00000571554 SIGIRRQ6IA17 410 aa10.9□□□□□ -0.66
RAB40B-204ENST00000571554 OR10K2Q6IF99 312 aa10.9□□□□□ -0.66
RAB40B-204ENST00000571554 LYPD6Q86Y78 171 aa10.9□□□□□ -0.66
RAB40B-204ENST00000571554 PHF21AQ96BD5 680 aa10.9□□□□□ -0.66
RAB40B-204ENST00000571554 VCXQ9H320 206 aa10.9□□□□□ -0.66
RAB40B-204ENST00000571554 GNG12Q9UBI6 72 aa10.9□□□□□ -0.66
RAB40B-204ENST00000571554 TSSC4Q9Y5U2 329 aaPredicted RBP10.9□□□□□ -0.66
RAB40B-204ENST00000571554 LINC01548A6NM66 108 aa10.89□□□□□ -0.67
RAB40B-204ENST00000571554 NCBP2LA6PVI3 153 aaKnown RBP10.89□□□□□ -0.67
RAB40B-204ENST00000571554 SERPINE3A8MV23 424 aa10.89□□□□□ -0.67
RAB40B-204ENST00000571554 ZNF736B4DX44 427 aaPredicted RBP10.89□□□□□ -0.67
RAB40B-204ENST00000571554 ORC5O43913 435 aa10.89□□□□□ -0.67
RAB40B-204ENST00000571554 MPIG6BO95866 241 aa10.89□□□□□ -0.67
RAB40B-204ENST00000571554 HBZP02008 142 aa10.89□□□□□ -0.67
RAB40B-204ENST00000571554 GAPDHP04406 335 aaKnown RBP10.89□□□□□ -0.67
RAB40B-204ENST00000571554 AQP4P55087 323 aa10.89□□□□□ -0.67
RAB40B-204ENST00000571554 GP2P55259 537 aaKnown RBP10.89□□□□□ -0.67
RAB40B-204ENST00000571554 ZNF816Q0VGE8 651 aaPredicted RBP10.89□□□□□ -0.67
RAB40B-204ENST00000571554 GPR50Q13585 617 aa10.89□□□□□ -0.67
RAB40B-204ENST00000571554 ACSM3Q53FZ2 586 aa10.89□□□□□ -0.67
RAB40B-204ENST00000571554 RBM48Q5RL73 367 aaKnown RBP10.89□□□□□ -0.67
RAB40B-204ENST00000571554 C6orf141Q5SZD1 244 aa10.89□□□□□ -0.67
RAB40B-204ENST00000571554 SLC16A12Q6ZSM3 486 aa10.89□□□□□ -0.67
RAB40B-204ENST00000571554 C18orf65Q6ZTR6 163 aa10.89□□□□□ -0.67
RAB40B-204ENST00000571554 NRG4Q8WWG1 115 aa10.89□□□□□ -0.67
RAB40B-204ENST00000571554 EAF1Q96JC9 268 aaPredicted RBP10.89□□□□□ -0.67
RAB40B-204ENST00000571554 Q96M66 194 aa10.89□□□□□ -0.67
RAB40B-204ENST00000571554 MND1Q9BWT6 205 aa10.89□□□□□ -0.67
RAB40B-204ENST00000571554 SPACA1Q9HBV2 294 aa10.89□□□□□ -0.67
RAB40B-204ENST00000571554 DNAH3Q8TD57 4116 aa10.88□□□□□ -0.67
RAB40B-204ENST00000571554 SPINT2O43291 252 aa10.88□□□□□ -0.67
RAB40B-204ENST00000571554 CD1AP06126 327 aa10.88□□□□□ -0.67
RAB40B-204ENST00000571554 MAPK3P27361 379 aaPredicted RBP10.88□□□□□ -0.67
RAB40B-204ENST00000571554 ZNF134P52741 427 aa10.88□□□□□ -0.67
RAB40B-204ENST00000571554 GNMTQ14749 295 aa10.88□□□□□ -0.67
RAB40B-204ENST00000571554 MED22Q15528 200 aa10.88□□□□□ -0.67
RAB40B-204ENST00000571554 Q6ZPA2 131 aa10.88□□□□□ -0.67
RAB40B-204ENST00000571554 NKAIN3Q8N8D7 197 aa10.88□□□□□ -0.67
RAB40B-204ENST00000571554 ZNF439Q8NDP4 499 aa10.88□□□□□ -0.67
RAB40B-204ENST00000571554 OR52M1Q8NGK5 317 aa10.88□□□□□ -0.67
RAB40B-204ENST00000571554 RTN4IP1Q8WWV3 396 aaPredicted RBP10.88□□□□□ -0.67
RAB40B-204ENST00000571554 MRPS24Q96EL2 167 aaKnown RBP10.88□□□□□ -0.67
RAB40B-204ENST00000571554 DCLRE1BQ9H816 532 aa10.88□□□□□ -0.67
RAB40B-204ENST00000571554 FUT3P21217 361 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 IL3RAP26951 378 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 CT45A1Q5HYN5 189 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 C6orf183Q5T699 404 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 FOXB2Q5VYV0 432 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 UNQ9370/PRO34162Q6UXP9 181 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 CEACAM19Q7Z692 300 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 SLC35E3Q7Z769 313 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 LRRTM1Q86UE6 522 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 CDH26Q8IXH8 852 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 LINC00311Q8N616 119 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 OR52L2PQ8NGH6 319 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 CT45A3Q8NHU0 189 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 MRPL30Q8TCC3 161 aaKnown RBP10.87□□□□□ -0.67
RAB40B-204ENST00000571554 MRAPQ8TCY5 172 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 TMEM203Q969S6 136 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 ST6GALNAC6Q969X2 333 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 UQCC2Q9BRT2 126 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 TAF9BQ9HBM6 251 aa10.87□□□□□ -0.67
RAB40B-204ENST00000571554 AURKAIP1Q9NWT8 199 aaPredicted RBP10.87□□□□□ -0.67
RAB40B-204ENST00000571554 LSM2Q9Y333 95 aaKnown RBP10.87□□□□□ -0.67
RAB40B-204ENST00000571554 H0YHG0 523 aa10.86□□□□□ -0.67
RAB40B-204ENST00000571554 FGF16O43320 207 aa10.86□□□□□ -0.67
RAB40B-204ENST00000571554 PDCD6O75340 191 aa10.86□□□□□ -0.67
RAB40B-204ENST00000571554 HSMCR30P0CW71 290 aa10.86□□□□□ -0.67
RAB40B-204ENST00000571554 VSIG8P0DPA2 414 aa10.86□□□□□ -0.67
RAB40B-204ENST00000571554 PPP1CCP36873 323 aaKnown RBP10.86□□□□□ -0.67
RAB40B-204ENST00000571554 SPHARQ15513 63 aa10.86□□□□□ -0.67
RAB40B-204ENST00000571554 LIPKQ5VXJ0 399 aa10.86□□□□□ -0.67
RAB40B-204ENST00000571554 SLC25A48Q6ZT89 311 aaKnown RBP10.86□□□□□ -0.67
RAB40B-204ENST00000571554 TGIF2LXQ8IUE1 241 aa10.86□□□□□ -0.67
RAB40B-204ENST00000571554 IZUMO1Q8IYV9 350 aa10.86□□□□□ -0.67
RAB40B-204ENST00000571554 GAPTQ8N292 157 aa10.86□□□□□ -0.67
RAB40B-204ENST00000571554 OR2T10Q8NGZ9 312 aa10.86□□□□□ -0.67
RAB40B-204ENST00000571554 SULT4A1Q9BR01 284 aa10.86□□□□□ -0.67
RAB40B-204ENST00000571554 NICN1Q9BSH3 213 aa10.86□□□□□ -0.67
RAB40B-204ENST00000571554 CST11Q9H112 138 aa10.86□□□□□ -0.67
RAB40B-204ENST00000571554 OR2S2Q9NQN1 319 aa10.86□□□□□ -0.67
RAB40B-204ENST00000571554 NECAP2Q9NVZ3 263 aa10.86□□□□□ -0.67
RAB40B-204ENST00000571554 SCN3BQ9NY72 215 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms