RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 C5orf24Q7Z6I8 188 aa10.01□□□□□ -0.81
SHMT2-209ENST00000553949 TEX29Q8N6K0 151 aa10.01□□□□□ -0.81
SHMT2-209ENST00000553949 OR10A7Q8NGE5 316 aa10.01□□□□□ -0.81
SHMT2-209ENST00000553949 NANPQ8TBE9 248 aa10.01□□□□□ -0.81
SHMT2-209ENST00000553949 C15orf40Q8WUR7 153 aa10.01□□□□□ -0.81
SHMT2-209ENST00000553949 LHX4Q969G2 390 aa10.01□□□□□ -0.81
SHMT2-209ENST00000553949 KIRREL1Q96J84 757 aa10.01□□□□□ -0.81
SHMT2-209ENST00000553949 ABHD1Q96SE0 405 aa10.01□□□□□ -0.81
SHMT2-209ENST00000553949 OCSTAMPQ9BR26 566 aa10.01□□□□□ -0.81
SHMT2-209ENST00000553949 ST6GALNAC5Q9BVH7 336 aa10.01□□□□□ -0.81
SHMT2-209ENST00000553949 HEXA-AS1Q9H8Q6 139 aa10.01□□□□□ -0.81
SHMT2-209ENST00000553949 RABL2AQ9UBK7 228 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-209ENST00000553949 RABL2BQ9UNT1 228 aa10.01□□□□□ -0.81
SHMT2-209ENST00000553949 DOCK11Q5JSL3 2073 aa10.01□□□□□ -0.81
SHMT2-209ENST00000553949 IGHV3OR16-10A0A075B7F0 116 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 IGKV1D-8A0A087WSZ0 117 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 A0A087X0M5 115 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 TRAV40A0A0B4J280 105 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 CENPVL3A0A0U1RRI6 287 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 A0A1B0GX30 115 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 FABP12A6NFH5 140 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 RNASEK-C17orf49H0YIS7 233 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 SDCBPO00560 298 aaPredicted RBP10□□□□□ -0.81
SHMT2-209ENST00000553949 FSHBP01225 129 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 LPLP06858 475 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 SCTP09683 121 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 IGHV4-38-2P0DP08 117 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 HOXB4P17483 251 aaPredicted RBP10□□□□□ -0.81
SHMT2-209ENST00000553949 COX7A1P24310 79 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 NFYBP25208 207 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 KIR2DS4P43632 304 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 CBX5P45973 191 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 KLRD1Q13241 179 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 IL18Q14116 193 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 KIR2DS1Q14954 304 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 KLF17Q5JT82 389 aaPredicted RBP10□□□□□ -0.81
SHMT2-209ENST00000553949 OR52W1Q6IF63 320 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 PYHIN1Q6K0P9 492 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 HCP5Q6MZN7 132 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 Q6ZS49 121 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 IL17RELQ6ZVW7 336 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 PDZD9Q8IXQ8 264 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 OR52M1Q8NGK5 317 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 OR13D1Q8NGV5 346 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 GPX8Q8TED1 209 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 GALMQ96C23 342 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 SOSTQ9BQB4 213 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 SUCNR1Q9BXA5 334 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 TMEM133Q9H2Q1 129 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 SCPEP1Q9HB40 452 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 PTTG2Q9NZH5 202 aa10□□□□□ -0.81
SHMT2-209ENST00000553949 TLN2Q9Y4G6 2542 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 IGHV3-43A0A0B4J1X8 118 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 IGHV1-69DA0A0B4J2H0 117 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 FAM172BPA6NC97 362 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 MEIS3P1A6NDR6 274 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 INAFM1C9JVW0 142 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 SULT1C2O00338 296 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 FABP7O15540 132 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 IGHV1-69P01742 117 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 GSTT2P0CG29 244 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 GSTT2BP0CG30 244 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 IGHV3-43DP0DP04 118 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 HNF1AP20823 631 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 LOXL3P58215 753 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 HTD2P86397 168 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 TMEM30BQ3MIR4 351 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 UTF1Q5T230 341 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 GPR157Q5UAW9 335 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 FAM131AQ6UXB0 335 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 CCDC190Q86UF4 302 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 HOGA1Q86XE5 327 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 PNKDQ8N490 385 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 GVQW1Q8N7I0 195 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 OR4A4PQ8NGN8 299 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 IL1F10Q8WWZ1 152 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 ZNF286AQ9HBT8 521 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 IFT46Q9NQC8 304 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 OR2S2Q9NQN1 319 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 GFOD1Q9NXC2 390 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 V9GYH0 126 aa9.99□□□□□ -0.81
SHMT2-209ENST00000553949 IGHV2-26A0A0B4J1V2 119 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 IGKV1-6A0A0C4DH72 117 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 CTDSPLO15194 276 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 FCER2P06734 321 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 CD34P28906 385 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 SRP14P37108 136 aaKnown RBP9.98□□□□□ -0.81
SHMT2-209ENST00000553949 ETV6P41212 452 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 UBE2E1P51965 193 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 MRPS10P82664 201 aaKnown RBP9.98□□□□□ -0.81
SHMT2-209ENST00000553949 HERPUD1Q15011 391 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 RNASE12Q5GAN4 147 aaKnown RBP9.98□□□□□ -0.81
SHMT2-209ENST00000553949 SPANXN2Q5MJ10 180 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 STEAP3Q658P3 488 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 FAM53AQ6NSI3 398 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-209ENST00000553949 ABHD12Q8N2K0 398 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 OR11H6Q8NGC7 330 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 OR52L2PQ8NGH6 319 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 OR10V1Q8NGI7 309 aa9.98□□□□□ -0.81
SHMT2-209ENST00000553949 OR52I2Q8NH67 350 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms