RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 CD5LO43866 347 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 CD3DP04234 171 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 AMY2AP04746 511 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 FCER2P06734 321 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 HLA-DMAP28067 261 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 HRH1P35367 487 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 ECI1P42126 302 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 GLIPR1P48060 266 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 TSPAN5P62079 268 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 GNB2P62879 340 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 RPL31P62899 125 aaKnown RBP7.88□□□□□ -1.15
YBX3-215ENST00000544504 HOXA4Q00056 320 aaPredicted RBP7.88□□□□□ -1.15
YBX3-215ENST00000544504 IFITM3Q01628 133 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 HMGN3Q15651 99 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 LYPD2Q6UXB3 125 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 RTN4RL2Q86UN3 420 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 OR10A7Q8NGE5 316 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 OR6F1Q8NGZ6 308 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 ENKURQ8TC29 256 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 FAM216AQ8WUB2 273 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 H1FXQ92522 213 aaKnown RBP7.88□□□□□ -1.15
YBX3-215ENST00000544504 DYRK2Q92630 601 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 SNAPC3Q92966 411 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 GALMQ96C23 342 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 SCGB3A2Q96PL1 93 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 C19orf24Q9BVV8 132 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 SSBP3Q9BWW4 388 aaPredicted RBP7.88□□□□□ -1.15
YBX3-215ENST00000544504 BPESC1Q9GZL8 116 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 TAF9BQ9HBM6 251 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 HRASLSQ9HDD0 168 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 YAE1D1Q9NRH1 226 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 MCUBQ9NWR8 336 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 SLC2A8Q9NY64 477 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 EHFQ9NZC4 300 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 SLC23A1Q9UHI7 598 aa7.88□□□□□ -1.15
YBX3-215ENST00000544504 ZNF230Q9UIE0 474 aaPredicted RBP7.88□□□□□ -1.15
YBX3-215ENST00000544504 LINC00854A0A1B0GVQ3 168 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 FAM240BA0A1B0GVZ2 78 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 A8MV72 311 aaPredicted RBP7.87□□□□□ -1.15
YBX3-215ENST00000544504 VWC2LB2RUY7 222 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 NPIPB11E5RHQ5 1161 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 RNF223E7ERA6 249 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 PLA2G10O15496 165 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 FOXH1O75593 365 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 IGHV2-5P01817 119 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 TFF1P04155 84 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 OR5H8P0DN80 308 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 RCC1P18754 421 aaPredicted RBP7.87□□□□□ -1.15
YBX3-215ENST00000544504 IL2RGP31785 369 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 SEC61A1P61619 476 aaKnown RBP7.87□□□□□ -1.15
YBX3-215ENST00000544504 CLEC12BQ2HXU8 276 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 WDR25Q64LD2 544 aaPredicted RBP7.87□□□□□ -1.15
YBX3-215ENST00000544504 OR52W1Q6IF63 320 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 ZNF782Q6ZMW2 699 aaPredicted RBP7.87□□□□□ -1.15
YBX3-215ENST00000544504 OVCH2Q7RTZ1 564 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 MAPK1IP1LQ8NDC0 245 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 OR4C16Q8NGL9 310 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 OR10J5Q8NHC4 309 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 CCDC107Q8WV48 283 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 ARL11Q969Q4 196 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 SLC25A21Q9BQT8 299 aaPredicted RBP7.87□□□□□ -1.15
YBX3-215ENST00000544504 GINS4Q9BRT9 223 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 CABLES2Q9BTV7 478 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 C11orf54Q9H0W9 315 aaPredicted RBP7.87□□□□□ -1.15
YBX3-215ENST00000544504 DPAGT1Q9H3H5 408 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 ING3Q9NXR8 418 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 CTSZQ9UBR2 303 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 CDC42EP3Q9UKI2 254 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 TBC1D24Q9ULP9 559 aa7.87□□□□□ -1.15
YBX3-215ENST00000544504 KBTBD11-OT1A0A1B0GTJ5 212 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 A8MXK9 166 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 HSPA12AO43301 675 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 RGS11O94810 467 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 HBZP02008 142 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 PMP2P02689 132 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 RBP4P02753 201 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 LIPFP07098 398 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 SELLP14151 372 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 ZBTB25P24278 435 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 SLC6A1P30531 599 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 RFX2P48378 723 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 HERV-K104P61576 105 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 HTD2P86397 168 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 RBMS2Q15434 407 aaKnown RBP7.86□□□□□ -1.15
YBX3-215ENST00000544504 TRIM16LQ309B1 348 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 PLET1Q6UQ28 207 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 DHRS11Q6UWP2 260 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 ZNF841Q6ZN19 808 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 FAM185AQ8N0U4 392 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 OR52M1Q8NGK5 317 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 OR13A1Q8NGR1 328 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 C8orf46Q8TAG6 207 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 MRGPRDQ8TDS7 321 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 MAFIPQ8WZ33 124 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 ZNF714Q96N38 554 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 DCTN5Q9BTE1 182 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 REG4Q9BYZ8 158 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 TINAGL1Q9GZM7 467 aaPredicted RBP7.86□□□□□ -1.15
YBX3-215ENST00000544504 LINC00574Q9H8X3 128 aa7.86□□□□□ -1.15
YBX3-215ENST00000544504 CALYQ9NYX4 217 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms