RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 RABL2AQ9UBK7 228 aaPredicted RBP14.01□□□□□ -0.17
LIG1-204ENST00000542460 ZNF230Q9UIE0 474 aaPredicted RBP14.01□□□□□ -0.17
LIG1-204ENST00000542460 RABL2BQ9UNT1 228 aa14.01□□□□□ -0.17
LIG1-204ENST00000542460 SVEP1Q4LDE5 3571 aa14.01□□□□□ -0.17
LIG1-204ENST00000542460 F2RL2O00254 374 aa14□□□□□ -0.17
LIG1-204ENST00000542460 FPR2P25090 351 aa14□□□□□ -0.17
LIG1-204ENST00000542460 HMGN3Q15651 99 aa14□□□□□ -0.17
LIG1-204ENST00000542460 TMEM30BQ3MIR4 351 aa14□□□□□ -0.17
LIG1-204ENST00000542460 SNX29P2Q8IUI4 249 aa14□□□□□ -0.17
LIG1-204ENST00000542460 OR13D1Q8NGV5 346 aa14□□□□□ -0.17
LIG1-204ENST00000542460 GALMQ96C23 342 aa14□□□□□ -0.17
LIG1-204ENST00000542460 TSC22D3Q99576 134 aa14□□□□□ -0.17
LIG1-204ENST00000542460 OCSTAMPQ9BR26 566 aa14□□□□□ -0.17
LIG1-204ENST00000542460 ST6GALNAC5Q9BVH7 336 aa14□□□□□ -0.17
LIG1-204ENST00000542460 TMEM133Q9H2Q1 129 aa14□□□□□ -0.17
LIG1-204ENST00000542460 WNK2Q9Y3S1 2297 aa14□□□□□ -0.17
LIG1-204ENST00000542460 CENPVL3A0A0U1RRI6 287 aa14□□□□□ -0.17
LIG1-204ENST00000542460 TRDCB7Z8K6 153 aa14□□□□□ -0.17
LIG1-204ENST00000542460 RNASEK-C17orf49H0YIS7 233 aa14□□□□□ -0.17
LIG1-204ENST00000542460 HOXB4P17483 251 aaPredicted RBP14□□□□□ -0.17
LIG1-204ENST00000542460 GDNFP39905 211 aa14□□□□□ -0.17
LIG1-204ENST00000542460 KIR2DS4P43632 304 aa14□□□□□ -0.17
LIG1-204ENST00000542460 CBX5P45973 191 aa14□□□□□ -0.17
LIG1-204ENST00000542460 DLX1P56177 255 aa14□□□□□ -0.17
LIG1-204ENST00000542460 HLA-DRB3P79483 266 aa14□□□□□ -0.17
LIG1-204ENST00000542460 GUCA2AQ02747 115 aa14□□□□□ -0.17
LIG1-204ENST00000542460 MADCAM1Q13477 382 aa14□□□□□ -0.17
LIG1-204ENST00000542460 KIR2DS1Q14954 304 aa14□□□□□ -0.17
LIG1-204ENST00000542460 GPR157Q5UAW9 335 aa14□□□□□ -0.17
LIG1-204ENST00000542460 Q6ZS49 121 aa14□□□□□ -0.17
LIG1-204ENST00000542460 OR52M1Q8NGK5 317 aa14□□□□□ -0.17
LIG1-204ENST00000542460 OR6Q1Q8NGQ2 317 aa14□□□□□ -0.17
LIG1-204ENST00000542460 OR1L1Q8NH94 360 aa14□□□□□ -0.17
LIG1-204ENST00000542460 UBALD1Q8TB05 177 aa14□□□□□ -0.17
LIG1-204ENST00000542460 BEX2Q9BXY8 128 aa14□□□□□ -0.17
LIG1-204ENST00000542460 SCPEP1Q9HB40 452 aa14□□□□□ -0.17
LIG1-204ENST00000542460 CDC42EP3Q9UKI2 254 aa14□□□□□ -0.17
LIG1-204ENST00000542460 DSCAML1Q8TD84 2053 aa13.99□□□□□ -0.17
LIG1-204ENST00000542460 HIVEP2P31629 2446 aa13.99□□□□□ -0.17
LIG1-204ENST00000542460 TRAV40A0A0B4J280 105 aa13.99□□□□□ -0.17
LIG1-204ENST00000542460 FABP12A6NFH5 140 aa13.99□□□□□ -0.17
LIG1-204ENST00000542460 INAFM1C9JVW0 142 aa13.99□□□□□ -0.17
LIG1-204ENST00000542460 SDCBPO00560 298 aaPredicted RBP13.99□□□□□ -0.17
LIG1-204ENST00000542460 FSHBP01225 129 aa13.99□□□□□ -0.17
LIG1-204ENST00000542460 NFYBP25208 207 aa13.99□□□□□ -0.17
LIG1-204ENST00000542460 UBE2E1P51965 193 aa13.99□□□□□ -0.17
LIG1-204ENST00000542460 PRB3Q04118 309 aaPredicted RBP13.99□□□□□ -0.17
LIG1-204ENST00000542460 IL18Q14116 193 aa13.99□□□□□ -0.17
LIG1-204ENST00000542460 KLF17Q5JT82 389 aaPredicted RBP13.99□□□□□ -0.17
LIG1-204ENST00000542460 MAFIPQ8WZ33 124 aa13.99□□□□□ -0.17
LIG1-204ENST00000542460 ABHD1Q96SE0 405 aa13.99□□□□□ -0.17
LIG1-204ENST00000542460 SUCNR1Q9BXA5 334 aa13.99□□□□□ -0.17
LIG1-204ENST00000542460 ZNF286AQ9HBT8 521 aa13.99□□□□□ -0.17
LIG1-204ENST00000542460 A0A087X0M5 115 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 A0A1B0GX30 115 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 MEIOCA2RUB1 952 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 SULT1C2O00338 296 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 LPLP06858 475 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 SCTP09683 121 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 IGHV4-38-2P0DP08 117 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 SRP14P37108 136 aaKnown RBP13.98□□□□□ -0.17
LIG1-204ENST00000542460 LOXL3P58215 753 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 BPIFB3P59826 476 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 HTD2P86397 168 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 KLRD1Q13241 179 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 LTC4SQ16873 150 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 PYHIN1Q6K0P9 492 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 HCP5Q6MZN7 132 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 IL17RELQ6ZVW7 336 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 C5orf24Q7Z6I8 188 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 CCDC190Q86UF4 302 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 PDZD9Q8IXQ8 264 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 PNKDQ8N490 385 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 OR4A4PQ8NGN8 299 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 GCDHQ92947 438 aaPredicted RBP13.98□□□□□ -0.17
LIG1-204ENST00000542460 PTTG2Q9NZH5 202 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 NUP50Q9UKX7 468 aa13.98□□□□□ -0.17
LIG1-204ENST00000542460 IGHV2-26A0A0B4J1V2 119 aa13.97□□□□□ -0.17
LIG1-204ENST00000542460 FABP7O15540 132 aa13.97□□□□□ -0.17
LIG1-204ENST00000542460 COX7A1P24310 79 aa13.97□□□□□ -0.17
LIG1-204ENST00000542460 CD34P28906 385 aa13.97□□□□□ -0.17
LIG1-204ENST00000542460 STEAP3Q658P3 488 aa13.97□□□□□ -0.17
LIG1-204ENST00000542460 HOGA1Q86XE5 327 aa13.97□□□□□ -0.17
LIG1-204ENST00000542460 ABHD12Q8N2K0 398 aa13.97□□□□□ -0.17
LIG1-204ENST00000542460 OR11H6Q8NGC7 330 aa13.97□□□□□ -0.17
LIG1-204ENST00000542460 GPX8Q8TED1 209 aa13.97□□□□□ -0.17
LIG1-204ENST00000542460 IL1F10Q8WWZ1 152 aa13.97□□□□□ -0.17
LIG1-204ENST00000542460 SOSTQ9BQB4 213 aa13.97□□□□□ -0.17
LIG1-204ENST00000542460 CLEC7AQ9BXN2 247 aa13.97□□□□□ -0.17
LIG1-204ENST00000542460 OR2S2Q9NQN1 319 aa13.97□□□□□ -0.17
LIG1-204ENST00000542460 GFOD1Q9NXC2 390 aa13.97□□□□□ -0.17
LIG1-204ENST00000542460 GNG12Q9UBI6 72 aa13.97□□□□□ -0.17
LIG1-204ENST00000542460 KIAA2026Q5HYC2 2103 aa13.97□□□□□ -0.17
LIG1-204ENST00000542460 IGHV3OR16-10A0A075B7F0 116 aa13.96□□□□□ -0.17
LIG1-204ENST00000542460 IGKV1D-8A0A087WSZ0 117 aa13.96□□□□□ -0.17
LIG1-204ENST00000542460 IGHV1-69DA0A0B4J2H0 117 aa13.96□□□□□ -0.17
LIG1-204ENST00000542460 IGHV1-69P01742 117 aa13.96□□□□□ -0.17
LIG1-204ENST00000542460 GSTT2P0CG29 244 aa13.96□□□□□ -0.17
LIG1-204ENST00000542460 GSTT2BP0CG30 244 aa13.96□□□□□ -0.17
LIG1-204ENST00000542460 MRPS10P82664 201 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms