RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 AQP10Q96PS8 301 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 TRAV34A0A0B4J273 112 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 CRYM-AS1A6NIL9 109 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 AGFG2O95081 481 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 DEFA4P12838 97 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 COX5AP20674 150 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 PPP1CBP62140 327 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 HES1Q14469 280 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 ZNF718Q3SXZ3 478 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 Q3ZCU0 254 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 CDCP2Q5VXM1 449 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 RPL36A-HNRNPH2H7BZ11 118 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 LINC01387J3KSC0 135 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 ZIC3O60481 467 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 SRSF3P84103 164 aaKnown RBP12.53□□□□□ -0.4
GCFC2-211ENST00000541687 FAM3AP98173 230 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 DCAF10Q5QP82 559 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 HES3Q5TGS1 186 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 POC1AQ8NBT0 407 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 PILRBQ9UKJ0 227 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 ARL2-SNX15V9GYD0 113 aa12.53□□□□□ -0.4
GCFC2-211ENST00000541687 IGKV1D-8A0A087WSZ0 117 aa12.52□□□□□ -0.4
GCFC2-211ENST00000541687 SPRY3O43610 288 aa12.52□□□□□ -0.4
GCFC2-211ENST00000541687 IL2RAP01589 272 aa12.52□□□□□ -0.4
GCFC2-211ENST00000541687 SLC25A6P12236 298 aa12.52□□□□□ -0.4
GCFC2-211ENST00000541687 PPP1CCP36873 323 aaKnown RBP12.52□□□□□ -0.4
GCFC2-211ENST00000541687 SUCLG1P53597 346 aaKnown RBP12.52□□□□□ -0.4
GCFC2-211ENST00000541687 SLC38A11Q08AI6 406 aa12.52□□□□□ -0.4
GCFC2-211ENST00000541687 ASPHD2Q6ICH7 369 aa12.52□□□□□ -0.4
GCFC2-211ENST00000541687 OR2J1Q9GZK6 312 aa12.52□□□□□ -0.4
GCFC2-211ENST00000541687 WNT5BQ9H1J7 359 aa12.52□□□□□ -0.4
GCFC2-211ENST00000541687 COL6A6A6NMZ7 2263 aa12.52□□□□□ -0.41
GCFC2-211ENST00000541687 BTBD17A6NE02 478 aa12.52□□□□□ -0.41
GCFC2-211ENST00000541687 SYNGR2O43760 224 aa12.52□□□□□ -0.41
GCFC2-211ENST00000541687 ZNF17P17021 662 aa12.52□□□□□ -0.41
GCFC2-211ENST00000541687 SPEM2Q0P670 501 aa12.52□□□□□ -0.41
GCFC2-211ENST00000541687 GINS3Q9BRX5 216 aa12.52□□□□□ -0.41
GCFC2-211ENST00000541687 MSL2Q9HCI7 577 aa12.52□□□□□ -0.41
GCFC2-211ENST00000541687 POMT1Q9Y6A1 747 aa12.52□□□□□ -0.41
GCFC2-211ENST00000541687 MAP1LC3B2A6NCE7 125 aa12.52□□□□□ -0.41
GCFC2-211ENST00000541687 SHISA7A6NL88 538 aa12.52□□□□□ -0.41
GCFC2-211ENST00000541687 CELA3AP09093 270 aa12.52□□□□□ -0.41
GCFC2-211ENST00000541687 DHRS11Q6UWP2 260 aa12.52□□□□□ -0.41
GCFC2-211ENST00000541687 ETV3LQ6ZN32 361 aa12.52□□□□□ -0.41
GCFC2-211ENST00000541687 TMEM252Q8N6L7 170 aa12.52□□□□□ -0.41
GCFC2-211ENST00000541687 ADAMTS17Q8TE56 1095 aa12.52□□□□□ -0.41
GCFC2-211ENST00000541687 RNF126Q9BV68 326 aa12.52□□□□□ -0.41
GCFC2-211ENST00000541687 MAP1LC3BQ9GZQ8 125 aa12.52□□□□□ -0.41
GCFC2-211ENST00000541687 TMEM30CPA0ZSE6 113 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 ZNF98A6NK75 572 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 M0R1X1 148 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 CRYAAP02489 173 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 CLEC3BP05452 202 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 SEC11BP0C7V7 166 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 MEOX2P50222 304 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 TOMM20LQ6UXN7 152 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 CALHM1Q8IU99 346 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 RAB40CQ96S21 281 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 TTTY12Q9BZ98 90 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 TMEM9BQ9NQ34 198 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 KCNIP2Q9NS61 270 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 FCGR3BO75015 233 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 HSBP1O75506 76 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 CNIH1O95406 144 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 SOX8P57073 446 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 BIVMQ86UB2 503 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 SLC35D1Q9NTN3 355 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 ZNF407Q9C0G0 2248 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 OR5B21A6NL26 309 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 C3orf80F5H4A9 247 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 CDS2O95674 445 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 CD200P41217 278 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 ZNF83P51522 516 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 GLRX5Q86SX6 157 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 MDP1Q86V88 176 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 TMEM251Q8N6I4 163 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 TMEM230Q96A57 120 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 LYZL4Q96KX0 146 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 LY86O95711 162 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 CTRB1P17538 263 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 MDKP21741 143 aaPredicted RBP12.51□□□□□ -0.41
GCFC2-211ENST00000541687 KIAA2026Q5HYC2 2103 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 CTRB2Q6GPI1 263 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 SMIM15Q7Z3B0 74 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 SARAFQ96BY9 339 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 RSG1Q9BU20 258 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 TREM2Q9NZC2 230 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 PRSS50Q9UI38 385 aa12.51□□□□□ -0.41
GCFC2-211ENST00000541687 OPN1MWP04001 364 aa12.5□□□□□ -0.41
GCFC2-211ENST00000541687 OPN1MW2P0DN77 364 aa12.5□□□□□ -0.41
GCFC2-211ENST00000541687 OPN1MW3P0DN78 364 aa12.5□□□□□ -0.41
GCFC2-211ENST00000541687 PMCHP20382 165 aa12.5□□□□□ -0.41
GCFC2-211ENST00000541687 PMELP40967 661 aa12.5□□□□□ -0.41
GCFC2-211ENST00000541687 IP6K3Q96PC2 410 aa12.5□□□□□ -0.41
GCFC2-211ENST00000541687 TP53RKQ96S44 253 aa12.5□□□□□ -0.41
GCFC2-211ENST00000541687 MYOZ1Q9NP98 299 aaPredicted RBP12.5□□□□□ -0.41
GCFC2-211ENST00000541687 PROCRQ9UNN8 238 aa12.5□□□□□ -0.41
GCFC2-211ENST00000541687 MPC1Q9Y5U8 109 aa12.5□□□□□ -0.41
GCFC2-211ENST00000541687 MBP02144 154 aa12.5□□□□□ -0.41
GCFC2-211ENST00000541687 USB1Q9BQ65 265 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms