RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 CCL19Q99731 98 aa14.71□□□□□ -0.05
CLIP1-215ENST00000541108 BEX2Q9BXY8 128 aa14.71□□□□□ -0.05
CLIP1-215ENST00000541108 BEX1Q9HBH7 125 aa14.71□□□□□ -0.05
CLIP1-215ENST00000541108 DCHS2Q6V1P9 2916 aa14.71□□□□□ -0.05
CLIP1-215ENST00000541108 TRGV10A0A0A0MS01 117 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 GPR37O15354 613 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 OR4E1P0C645 316 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 CGB3P0DN86 165 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 CGB7P0DN87 165 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 VSIG10L2P0DP72 767 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 NDUFB7P17568 137 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 AADACP22760 399 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 HERV-K104P61576 105 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 TMEM128Q5BJH2 165 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 ZNF295-AS1Q8N0V1 137 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 ARL11Q969Q4 196 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 RTBDNQ9BSG5 229 aaPredicted RBP14.71□□□□□ -0.06
CLIP1-215ENST00000541108 OR51J1Q9H342 316 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 LPAR3Q9UBY5 353 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 MIOXQ9UGB7 285 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 ZNF221Q9UK13 617 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 OR2W1Q9Y3N9 320 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 DSCAML1Q8TD84 2053 aa14.71□□□□□ -0.06
CLIP1-215ENST00000541108 hADV38S2A0JD32 116 aa14.7□□□□□ -0.06
CLIP1-215ENST00000541108 FAM172BPA6NC97 362 aa14.7□□□□□ -0.06
CLIP1-215ENST00000541108 HMX3A6NHT5 357 aa14.7□□□□□ -0.06
CLIP1-215ENST00000541108 DVL1O14640 695 aa14.7□□□□□ -0.06
CLIP1-215ENST00000541108 HSPA12AO43301 675 aa14.7□□□□□ -0.06
CLIP1-215ENST00000541108 PPIHO43447 177 aaKnown RBP14.7□□□□□ -0.06
CLIP1-215ENST00000541108 CREBL2O60519 120 aaPredicted RBP14.7□□□□□ -0.06
CLIP1-215ENST00000541108 CTSDP07339 412 aaPredicted RBP14.7□□□□□ -0.06
CLIP1-215ENST00000541108 ZNF728P0DKX0 622 aa14.7□□□□□ -0.06
CLIP1-215ENST00000541108 DHODHQ02127 395 aa14.7□□□□□ -0.06
CLIP1-215ENST00000541108 SLC38A6Q8IZM9 456 aa14.7□□□□□ -0.06
CLIP1-215ENST00000541108 ZNF486Q96H40 463 aaPredicted RBP14.7□□□□□ -0.06
CLIP1-215ENST00000541108 LINC00574Q9H8X3 128 aa14.7□□□□□ -0.06
CLIP1-215ENST00000541108 CTSZQ9UBR2 303 aa14.7□□□□□ -0.06
CLIP1-215ENST00000541108 C14orf166Q9Y224 244 aaKnown RBP14.7□□□□□ -0.06
CLIP1-215ENST00000541108 USF3Q68DE3 2245 aa14.7□□□□□ -0.06
CLIP1-215ENST00000541108 NDUFS7O75251 213 aa14.69□□□□□ -0.06
CLIP1-215ENST00000541108 PGAM2P15259 253 aa14.69□□□□□ -0.06
CLIP1-215ENST00000541108 SSTR5P35346 364 aa14.69□□□□□ -0.06
CLIP1-215ENST00000541108 RRAS2P62070 204 aaPredicted RBP14.69□□□□□ -0.06
CLIP1-215ENST00000541108 BAMBIQ13145 260 aa14.69□□□□□ -0.06
CLIP1-215ENST00000541108 CBX3Q13185 183 aa14.69□□□□□ -0.06
CLIP1-215ENST00000541108 CARTPTQ16568 116 aa14.69□□□□□ -0.06
CLIP1-215ENST00000541108 C4orf46Q504U0 113 aa14.69□□□□□ -0.06
CLIP1-215ENST00000541108 ZNF626Q68DY1 528 aa14.69□□□□□ -0.06
CLIP1-215ENST00000541108 SPICQ8N5J4 248 aa14.69□□□□□ -0.06
CLIP1-215ENST00000541108 OR1L1Q8NH94 360 aa14.69□□□□□ -0.06
CLIP1-215ENST00000541108 CAPSLQ8WWF8 208 aa14.69□□□□□ -0.06
CLIP1-215ENST00000541108 DCTN5Q9BTE1 182 aa14.69□□□□□ -0.06
CLIP1-215ENST00000541108 TAS2R3Q9NYW6 316 aa14.69□□□□□ -0.06
CLIP1-215ENST00000541108 UBE2J1Q9Y385 318 aaPredicted RBP14.69□□□□□ -0.06
CLIP1-215ENST00000541108 LINC00312Q9Y6C7 94 aa14.69□□□□□ -0.06
CLIP1-215ENST00000541108 KBTBD11-OT1A0A1B0GTJ5 212 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 ZNF729A6NN14 1252 aaPredicted RBP14.68□□□□□ -0.06
CLIP1-215ENST00000541108 F2RL2O00254 374 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 FCN3O75636 299 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 CEACAM6P40199 344 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 FXYD4P59646 89 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 RPL31P62899 125 aaKnown RBP14.68□□□□□ -0.06
CLIP1-215ENST00000541108 NLRC3Q7RTR2 1065 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 NINJ1Q92982 152 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 TOMM40LQ969M1 308 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 DACT3Q96B18 629 aaPredicted RBP14.68□□□□□ -0.06
CLIP1-215ENST00000541108 RSRP1Q9BUV0 290 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 FXYD6Q9H0Q3 95 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 OR2S2Q9NQN1 319 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 OR1A1Q9P1Q5 309 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 CLN8Q9UBY8 286 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 ZNF69Q9UC07 566 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 TMEM30BQ3MIR4 351 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 AVPI1Q5T686 147 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 CD276Q5ZPR3 534 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 ZNF841Q6ZN19 808 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 ADAD2Q8NCV1 583 aaKnown RBP14.68□□□□□ -0.06
CLIP1-215ENST00000541108 ZNF431Q8TF32 576 aaPredicted RBP14.68□□□□□ -0.06
CLIP1-215ENST00000541108 FAM216AQ8WUB2 273 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 NEURL2Q9BR09 285 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 SEC22CQ9BRL7 303 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 MED28Q9H204 178 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 RDH8Q9NYR8 311 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 CALYQ9NYX4 217 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 JPT1Q9UK76 154 aa14.68□□□□□ -0.06
CLIP1-215ENST00000541108 TRBV23-1A0A0A0MS06 115 aa14.67□□□□□ -0.06
CLIP1-215ENST00000541108 WNT2P09544 360 aa14.67□□□□□ -0.06
CLIP1-215ENST00000541108 RPS2P15880 293 aaKnown RBP14.67□□□□□ -0.06
CLIP1-215ENST00000541108 AKR1C4P17516 323 aa14.67□□□□□ -0.06
CLIP1-215ENST00000541108 GPR6P46095 362 aaPredicted RBP14.67□□□□□ -0.06
CLIP1-215ENST00000541108 DHRS2Q13268 280 aa14.67□□□□□ -0.06
CLIP1-215ENST00000541108 C17orf58Q2M2W7 97 aa14.67□□□□□ -0.06
CLIP1-215ENST00000541108 LYG2Q86SG7 212 aa14.67□□□□□ -0.06
CLIP1-215ENST00000541108 PPP1R14BQ96C90 147 aa14.67□□□□□ -0.06
CLIP1-215ENST00000541108 NEIL1Q96FI4 390 aaPredicted RBP14.67□□□□□ -0.06
CLIP1-215ENST00000541108 HLA-AP01891 365 aaKnown RBP14.66□□□□□ -0.06
CLIP1-215ENST00000541108 PI3P19957 117 aa14.66□□□□□ -0.06
CLIP1-215ENST00000541108 GNRHRP30968 328 aa14.66□□□□□ -0.06
CLIP1-215ENST00000541108 LUMP51884 338 aaPredicted RBP14.66□□□□□ -0.06
CLIP1-215ENST00000541108 PPP1R1AQ13522 171 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms