RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ZNF561Q8N587 486 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 OR10G4Q8NGN3 311 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 OR10G9Q8NGN4 311 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 OR10G7Q8NGN6 311 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 NEU4Q8WWR8 484 aaPredicted RBP9.78□□□□□ -0.84
PTPRK-221ENST00000532331 GPA33Q99795 319 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 VKORC1Q9BQB6 163 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 MRPS18AQ9NVS2 196 aaKnown RBP9.78□□□□□ -0.84
PTPRK-221ENST00000532331 FBXL17Q9UF56 701 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 TRAV8-7A0A075B6U6 113 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 SLC6A1P30531 599 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 LYZP61626 148 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 POLR2GP62487 172 aaKnown RBP eCLIP9.78□□□□□ -0.84
PTPRK-221ENST00000532331 MYPOPQ86VE0 399 aaPredicted RBP9.78□□□□□ -0.84
PTPRK-221ENST00000532331 GAPTQ8N292 157 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 TMEM18Q96B42 140 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 IGLV3-12A0A075B6K2 115 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 NKX2-6A6NCS4 301 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 MS4A18H0YCH9 400 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 SOX15O60248 233 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 CD200P41217 278 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 MS4A18Q3C1V0 323 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 BLNKQ8WV28 456 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 YTHDF2Q9Y5A9 579 aaKnown RBP9.78□□□□□ -0.84
PTPRK-221ENST00000532331 RPL36A-HNRNPH2H7BZ11 118 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 ZNHIT1O43257 154 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 RAB5AP20339 215 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 MGAT2Q10469 447 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 PIGYQ3MUY2 71 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 NSUN5P2Q63ZY6 315 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 ZBTB34Q8NCN2 500 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 OR4A4PQ8NGN8 299 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 KLF14Q8TD94 323 aaPredicted RBP9.78□□□□□ -0.84
PTPRK-221ENST00000532331 PRSS27Q9BQR3 290 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 DOK5Q9P104 306 aa9.78□□□□□ -0.84
PTPRK-221ENST00000532331 ZNF737O75373 536 aa9.77□□□□□ -0.84
PTPRK-221ENST00000532331 ADAP1O75689 374 aa9.77□□□□□ -0.84
PTPRK-221ENST00000532331 CYB5R3P00387 301 aaPredicted RBP9.77□□□□□ -0.84
PTPRK-221ENST00000532331 VSIG8P0DPA2 414 aa9.77□□□□□ -0.84
PTPRK-221ENST00000532331 ORM2P19652 201 aa9.77□□□□□ -0.84
PTPRK-221ENST00000532331 P2RY1P47900 373 aa9.77□□□□□ -0.84
PTPRK-221ENST00000532331 SUCLG1P53597 346 aaKnown RBP9.77□□□□□ -0.84
PTPRK-221ENST00000532331 TEX30Q5JUR7 227 aa9.77□□□□□ -0.84
PTPRK-221ENST00000532331 NHLRC2Q8NBF2 726 aa9.77□□□□□ -0.84
PTPRK-221ENST00000532331 PHYHIPLQ96FC7 376 aa9.77□□□□□ -0.84
PTPRK-221ENST00000532331 RNF122Q9H9V4 155 aa9.77□□□□□ -0.84
PTPRK-221ENST00000532331 LOC102723996A0A087X1L8 192 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 HMSDA8MTL9 139 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 GAPDHP04406 335 aaKnown RBP9.77□□□□□ -0.85
PTPRK-221ENST00000532331 CPN1P15169 458 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 ZNF708P17019 499 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 FCER1GP30273 86 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 GNG4P50150 75 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 ADAT3Q96EY9 351 aaPredicted RBP9.77□□□□□ -0.85
PTPRK-221ENST00000532331 HARBI1Q96MB7 349 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 CCL28Q9NRJ3 127 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 PPIAL4CA0A0B4J2A2 164 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 A0A0U1RQV5 110 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 PPIAL4GP0DN37 164 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 CD40P25942 277 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 TMEM241Q24JQ0 296 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 SSX7Q7RTT5 188 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 OR2W1Q9Y3N9 320 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 ARL2-SNX15V9GYD0 113 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 SVILO95425 2214 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 GNG7O60262 68 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 COX5BP10606 129 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 TMEM88Q6PEY1 159 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 ZNF488Q96MN9 340 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 SLC25A22Q9H936 323 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 NIT2Q9NQR4 276 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 ZNF646O15015 1829 aaPredicted RBP9.77□□□□□ -0.85
PTPRK-221ENST00000532331 PATJQ8NI35 1801 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 A0A0G2JMM0 328 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 A0A1W2PPB8 328 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 A0A1W2PRS3 328 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 KIR3DP1A8MWS1 328 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 K7N7A8 449 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 GNLYP22749 145 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 TMEM33P57088 247 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 PAFAH1B2P68402 229 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 BSPH1Q075Z2 132 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 FA2HQ7L5A8 372 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 PRNDQ9UKY0 176 aa9.77□□□□□ -0.85
PTPRK-221ENST00000532331 EP300Q09472 2414 aaPredicted RBP9.76□□□□□ -0.85
PTPRK-221ENST00000532331 OR2J3O76001 311 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 FOSL1P15407 271 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 DYNLT3P51808 116 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 PRSS53Q2L4Q9 553 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 DTD1Q8TEA8 209 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 TMEM45BQ96B21 275 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 SNRNP40Q96DI7 357 aaKnown RBP9.76□□□□□ -0.85
PTPRK-221ENST00000532331 LINC00470Q9BZP3 86 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 ST6GALNAC2Q9UJ37 374 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 OR1B1Q8NGR6 318 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 TMPRSS5Q9H3S3 457 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 POMT1Q9Y6A1 747 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 V9GYH0 126 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 TTRP02766 147 aa9.76□□□□□ -0.85
PTPRK-221ENST00000532331 REG1BP48304 166 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms