RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 H1FOOQ8IZA3 346 aaPredicted RBP7.06□□□□□ -1.28
SF3A1-210ENST00000498259 TCTEX1D1Q8N7M0 179 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 ZNRF1Q8ND25 227 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 DEFB108BQ8NET1 73 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 OR10V1Q8NGI7 309 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 PLPPR1Q8TBJ4 325 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 SECTM1Q8WVN6 248 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 RTN4IP1Q8WWV3 396 aaPredicted RBP7.06□□□□□ -1.28
SF3A1-210ENST00000498259 CORO2AQ92828 525 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 GALNT14Q96FL9 552 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 SEC22CQ9BRL7 303 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 PDCD10Q9BUL8 212 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 CHODLQ9H9P2 273 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 UBTD1Q9HAC8 227 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 RAB18Q9NP72 206 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 SLC2A9Q9NRM0 540 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 SLC25A10Q9UBX3 287 aaPredicted RBP7.06□□□□□ -1.28
SF3A1-210ENST00000498259 MIOXQ9UGB7 285 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 JPT1Q9UK76 154 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 CACNA1BQ00975 2339 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 COL6A6A6NMZ7 2263 aa7.06□□□□□ -1.28
SF3A1-210ENST00000498259 KBTBD11-OT1A0A1B0GTJ5 212 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 DUXBA0A1W2PPF3 345 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 CRYM-AS1A6NIL9 109 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 C12orf77C9JDV5 145 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 ITGB1BP1O14713 200 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 MPPED1O15442 326 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 ADAM20O43506 726 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 F12P00748 615 aaPredicted RBP7.05□□□□□ -1.28
SF3A1-210ENST00000498259 HBZP02008 142 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 C1QBP02746 253 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 HPXP02790 462 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 DANCRP0C864 163 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 PET100P0DJ07 73 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 VSIG10L2P0DP72 767 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 COX6B1P14854 86 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 DAOP14920 347 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 GLIPR1P48060 266 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 EFNA4P52798 201 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 RPL31P62899 125 aaKnown RBP7.05□□□□□ -1.28
SF3A1-210ENST00000498259 BAMBIQ13145 260 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 CATR1Q13166 79 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 FCN2Q15485 313 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 TMEM155Q4W5P6 130 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 LY6G6FQ5SQ64 297 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 GSG1LQ6UXU4 331 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 LGI3Q8N145 548 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 ZCCHC24Q8N2G6 241 aaKnown RBP7.05□□□□□ -1.28
SF3A1-210ENST00000498259 OR52M1Q8NGK5 317 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 MRGPRDQ8TDS7 321 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 CASTOR1Q8WTX7 329 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 COQ2Q96H96 371 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 GAFA1Q96PS6 74 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 CCL13Q99616 98 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 RTBDNQ9BSG5 229 aaPredicted RBP7.05□□□□□ -1.28
SF3A1-210ENST00000498259 TOLLIPQ9H0E2 274 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 NAA60Q9H7X0 242 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 METTL8Q9H825 291 aaKnown RBP7.05□□□□□ -1.28
SF3A1-210ENST00000498259 BARX1Q9HBU1 254 aaPredicted RBP7.05□□□□□ -1.28
SF3A1-210ENST00000498259 RDH8Q9NYR8 311 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 GNG12Q9UBI6 72 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 CLN8Q9UBY8 286 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 LAMP3Q9UQV4 416 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 MAB21L2Q9Y586 359 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 LINC00312Q9Y6C7 94 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 NBEAQ8NFP9 2946 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 PCNX1Q96RV3 2341 aa7.05□□□□□ -1.28
SF3A1-210ENST00000498259 ATRXP46100 2492 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 C5orf51A6NDU8 294 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 GOSR2O14653 212 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 YPEL1O60688 119 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 OR2A4O95047 310 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 PRB1P04280 392 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 SERPINE2P07093 398 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 RPA2P15927 270 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 Q3ZCU0 254 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 ESCO2Q56NI9 601 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 C11orf71Q6IPW1 123 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 CLEC18BQ6UXF7 455 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 NOXA1Q86UR1 476 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 ZNF645Q8N7E2 425 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 ADAD2Q8NCV1 583 aaKnown RBP7.04□□□□□ -1.28
SF3A1-210ENST00000498259 BVESQ8NE79 360 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 OR8B3Q8NGG8 313 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 OR5M8Q8NGP6 311 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 CD300LFQ8TDQ1 290 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 CAPSLQ8WWF8 208 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 MRGPRFQ96AM1 343 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 ST6GAL2Q96JF0 529 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 DMRTB1Q96MA1 342 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 BBC3Q96PG8 261 aaPredicted RBP7.04□□□□□ -1.28
SF3A1-210ENST00000498259 YPEL2Q96QA6 119 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 OR2A7Q96R45 310 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 OR8B2Q96RD0 313 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 SPIN2AQ99865 258 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 SPIN2BQ9BPZ2 258 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 TMPRSS13Q9BYE2 586 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 PLEKHF2Q9H8W4 249 aa7.04□□□□□ -1.28
SF3A1-210ENST00000498259 RANGRFQ9HD47 186 aaPredicted RBP7.04□□□□□ -1.28
SF3A1-210ENST00000498259 FAM212BQ9NTI7 297 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms