RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, human

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-A-208	ENST00000496081	SWI5	Q1ZZU3	235 aa		13.68	□□□□□ -0.22
HLA-A-208	ENST00000496081	TEX36	Q5VZQ5	186 aa		13.68	□□□□□ -0.22
HLA-A-208	ENST00000496081	LDLRAD3	Q86YD5	345 aa		13.68	□□□□□ -0.22
HLA-A-208	ENST00000496081	C9orf62	Q8N4C0	152 aa		13.68	□□□□□ -0.22
HLA-A-208	ENST00000496081	DEFB108B	Q8NET1	73 aa		13.68	□□□□□ -0.22
HLA-A-208	ENST00000496081	PPP1R35	Q8TAP8	253 aa		13.68	□□□□□ -0.22
HLA-A-208	ENST00000496081	SECTM1	Q8WVN6	248 aa		13.68	□□□□□ -0.22
HLA-A-208	ENST00000496081	LRRC30	A6NM36	301 aa		13.67	□□□□□ -0.22
HLA-A-208	ENST00000496081		K7N7A8	449 aa		13.67	□□□□□ -0.22
HLA-A-208	ENST00000496081	MGST3	O14880	152 aa		13.67	□□□□□ -0.22
HLA-A-208	ENST00000496081	HEXA	P06865	529 aa		13.67	□□□□□ -0.22
HLA-A-208	ENST00000496081	EDDM3A	Q14507	147 aa		13.67	□□□□□ -0.22
HLA-A-208	ENST00000496081	MUC15	Q8N387	334 aa		13.67	□□□□□ -0.22
HLA-A-208	ENST00000496081	ZNF565	Q8N9K5	539 aa		13.67	□□□□□ -0.22
HLA-A-208	ENST00000496081	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	13.67	□□□□□ -0.22
HLA-A-208	ENST00000496081	OR13A1	Q8NGR1	328 aa		13.67	□□□□□ -0.22
HLA-A-208	ENST00000496081	GRPEL2	Q8TAA5	225 aa		13.67	□□□□□ -0.22
HLA-A-208	ENST00000496081	MRGPRD	Q8TDS7	321 aa		13.67	□□□□□ -0.22
HLA-A-208	ENST00000496081	SDSL	Q96GA7	329 aa		13.67	□□□□□ -0.22
HLA-A-208	ENST00000496081	SLC5A7	Q9GZV3	580 aa		13.67	□□□□□ -0.22
HLA-A-208	ENST00000496081	NAA60	Q9H7X0	242 aa		13.67	□□□□□ -0.22
HLA-A-208	ENST00000496081	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	RGS11	O94810	467 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	MUC1	P15941	1255 aa	Predicted RBP	13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	ZNF818P	Q6ZRF7	136 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	ZNF561	Q8N587	486 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	OR1L1	Q8NH94	360 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	GALNT14	Q96FL9	552 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	SEC22A	Q96IW7	307 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	LURAP1	Q96LR2	239 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	RAB18	Q9NP72	206 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	CCL28	Q9NRJ3	127 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	KCNIP3	Q9Y2W7	256 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	ABCA4	P78363	2273 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081		A0A1B0GW55	424 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	FAM25E	A8MYX2	175 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	HSPA12A	O43301	675 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	ADAP1	O75689	374 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	CD8A	P01732	235 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	HBZ	P02008	142 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	DUX4L2	P0CJ85	424 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	DUX4L3	P0CJ86	424 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	DUX4L4	P0CJ87	422 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	DUX4L5	P0CJ88	424 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	DUX4L6	P0CJ89	424 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	DUX4L7	P0CJ90	424 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	IFITM2	Q01629	132 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	C6orf183	Q5T699	404 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	DUX4L9	Q6RFH8	374 aa	Predicted RBP	13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	CCDC71L	Q8N9Z2	235 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	GALM	Q96C23	342 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	GAFA1	Q96PS6	74 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	DCTN5	Q9BTE1	182 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	PDCD10	Q9BUL8	212 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	DUX4	Q9UBX2	424 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	HSPB11	Q9Y547	144 aa		13.66	□□□□□ -0.22
HLA-A-208	ENST00000496081	TMEM178B	H3BS89	294 aa		13.65	□□□□□ -0.22
HLA-A-208	ENST00000496081	GPR31	O00270	319 aa		13.65	□□□□□ -0.22
HLA-A-208	ENST00000496081	GYPA	P02724	150 aa		13.65	□□□□□ -0.22
HLA-A-208	ENST00000496081	OR5AC1	P0C628	307 aa		13.65	□□□□□ -0.22
HLA-A-208	ENST00000496081	SELL	P14151	372 aa		13.65	□□□□□ -0.22
HLA-A-208	ENST00000496081	CEACAM6	P40199	344 aa		13.65	□□□□□ -0.22
HLA-A-208	ENST00000496081	RND3	P61587	244 aa		13.65	□□□□□ -0.22
HLA-A-208	ENST00000496081	TMEM187	Q14656	261 aa		13.65	□□□□□ -0.22
HLA-A-208	ENST00000496081	SP6	Q3SY56	376 aa		13.65	□□□□□ -0.22
HLA-A-208	ENST00000496081	ZNF788	Q6ZQV5	615 aa		13.65	□□□□□ -0.22
HLA-A-208	ENST00000496081	FAM185A	Q8N0U4	392 aa		13.65	□□□□□ -0.22
HLA-A-208	ENST00000496081	CCL17	Q92583	94 aa		13.65	□□□□□ -0.22
HLA-A-208	ENST00000496081	CCL13	Q99616	98 aa		13.65	□□□□□ -0.22
HLA-A-208	ENST00000496081	RDH8	Q9NYR8	311 aa		13.65	□□□□□ -0.22
HLA-A-208	ENST00000496081	C13orf42	A0A1B0GVH6	325 aa		13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	ODAM	A1E959	279 aa		13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	MEX3A	A1L020	520 aa	Known RBP	13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	HSD17B6	O14756	317 aa		13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	MPPED1	O15442	326 aa		13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	IL2RG	P31785	369 aa		13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	SSTR5	P35346	364 aa		13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	P2RX3	P56373	397 aa		13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	SNRPD2	P62316	118 aa	Known RBP	13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	GSG1L	Q6UXU4	331 aa		13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	C1orf87	Q8N0U7	546 aa		13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	OR5D13	Q8NGL4	314 aa		13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	TMEM246	Q9BRR3	403 aa		13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	PARP12	Q9H0J9	701 aa	Known RBP	13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	DNTTIP1	Q9H147	329 aa		13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	ZNF665	Q9H7R5	613 aa		13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	TMEM106B	Q9NUM4	274 aa		13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	TANC2	Q9HCD6	1990 aa		13.64	□□□□□ -0.23
HLA-A-208	ENST00000496081	C5orf51	A6NDU8	294 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	MPTX1	A8MV57	137 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	LGALS8	O00214	317 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	LGALSL	Q3ZCW2	172 aa	Predicted RBP	13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	OR52L2P	Q8NGH6	319 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	OR10V1	Q8NGI7	309 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	GLYATL2	Q8WU03	294 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	ARL11	Q969Q4	196 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	SUCNR1	Q9BXA5	334 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	METTL8	Q9H825	291 aa	Known RBP	13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	PPIAL4E	A0A075B759	164 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	TRAV14DV4	A0A0A6YYC5	116 aa		13.63	□□□□□ -0.23

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