RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 HEPN1Q6WQI6 88 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 C1orf122Q6ZSJ8 110 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 IL17RELQ6ZVW7 336 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 ZNF554Q86TJ5 538 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 RFESDQ8TAC1 157 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 MAFIPQ8WZ33 124 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 ARL11Q969Q4 196 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 KIRREL1Q96J84 757 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 TAF9BQ9HBM6 251 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 Q9N2K0 584 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 PTTG2Q9NZH5 202 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 MGAT4AQ9UM21 535 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 SESN1Q9Y6P5 492 aa12.55□□□□□ -0.4
SEC13-215ENST00000477547 FAM172BPA6NC97 362 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 SPINT2O43291 252 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 MMP23AO75900 390 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 HBZP02008 142 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 MELTFP08582 738 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 GZMHP20718 246 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 PRTN3P24158 256 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 COX7A1P24310 79 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 TNFSF8P32971 234 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 GDNFP39905 211 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 IL18Q14116 193 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 RNASE12Q5GAN4 147 aaKnown RBP12.54□□□□□ -0.4
SEC13-215ENST00000477547 FAM120AOSQ5T036 256 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 C1orf229Q6ZS94 237 aaPredicted RBP12.54□□□□□ -0.4
SEC13-215ENST00000477547 C11orf42Q8N5U0 333 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 OR1L1Q8NH94 360 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 LHX4Q969G2 390 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 SUCNR1Q9BXA5 334 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 UNKLQ9H9P5 680 aaKnown RBP12.54□□□□□ -0.4
SEC13-215ENST00000477547 ZNF286AQ9HBT8 521 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 TMEM160Q9NX00 188 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 IDI2-AS1Q9NZ38 188 aa12.54□□□□□ -0.4
SEC13-215ENST00000477547 ZNF230Q9UIE0 474 aaPredicted RBP12.54□□□□□ -0.4
SEC13-215ENST00000477547 IGHV3OR16-10A0A075B7F0 116 aa12.53□□□□□ -0.4
SEC13-215ENST00000477547 MEIS3P1A6NDR6 274 aa12.53□□□□□ -0.4
SEC13-215ENST00000477547 POM121CA8CG34 1229 aa12.53□□□□□ -0.4
SEC13-215ENST00000477547 NPIPB11E5RHQ5 1161 aa12.53□□□□□ -0.4
SEC13-215ENST00000477547 SDCBPO00560 298 aaPredicted RBP12.53□□□□□ -0.4
SEC13-215ENST00000477547 HLA-DQB1P01920 261 aa12.53□□□□□ -0.4
SEC13-215ENST00000477547 LPLP06858 475 aa12.53□□□□□ -0.4
SEC13-215ENST00000477547 FPR2P25090 351 aa12.53□□□□□ -0.4
SEC13-215ENST00000477547 NFYBP25208 207 aa12.53□□□□□ -0.4
SEC13-215ENST00000477547 PRSS3P35030 304 aa12.53□□□□□ -0.4
SEC13-215ENST00000477547 KIR2DS4P43632 304 aa12.53□□□□□ -0.4
SEC13-215ENST00000477547 KIR2DS1Q14954 304 aa12.53□□□□□ -0.4
SEC13-215ENST00000477547 TMEM30BQ3MIR4 351 aa12.53□□□□□ -0.4
SEC13-215ENST00000477547 PDZD9Q8IXQ8 264 aa12.53□□□□□ -0.4
SEC13-215ENST00000477547 TEX29Q8N6K0 151 aa12.53□□□□□ -0.4
SEC13-215ENST00000477547 OR6Q1Q8NGQ2 317 aa12.53□□□□□ -0.4
SEC13-215ENST00000477547 LINC00574Q9H8X3 128 aa12.53□□□□□ -0.4
SEC13-215ENST00000477547 IFT46Q9NQC8 304 aa12.53□□□□□ -0.4
SEC13-215ENST00000477547 IGHV3-43A0A0B4J1X8 118 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 MEIOCA2RUB1 952 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 RNASEK-C17orf49H0YIS7 233 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 F2RL2O00254 374 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 FSHBP01225 129 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 IGHV3-43DP0DP04 118 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 IGHV4-38-2P0DP08 117 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 CBX5P45973 191 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 GPR157Q5UAW9 335 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 OR52W1Q6IF63 320 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 PYHIN1Q6K0P9 492 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 FAM131AQ6UXB0 335 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 C5orf24Q7Z6I8 188 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 OR10A7Q8NGE5 316 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 C15orf40Q8WUR7 153 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 IL1F10Q8WWZ1 152 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 TNFRSF14Q92956 283 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 ST6GALNAC5Q9BVH7 336 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 TMEM133Q9H2Q1 129 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 SCPEP1Q9HB40 452 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 GNG12Q9UBI6 72 aa12.52□□□□□ -0.41
SEC13-215ENST00000477547 IGHV2-26A0A0B4J1V2 119 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 TRDCB7Z8K6 153 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 FABP7O15540 132 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 TPPPO94811 219 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 FCER2P06734 321 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 SRP14P37108 136 aaKnown RBP12.51□□□□□ -0.41
SEC13-215ENST00000477547 GNMTQ14749 295 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 KLF17Q5JT82 389 aaPredicted RBP12.51□□□□□ -0.41
SEC13-215ENST00000477547 SPANXN2Q5MJ10 180 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 Q6ZS49 121 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 CCDC190Q86UF4 302 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 PNKDQ8N490 385 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 GVQW1Q8N7I0 195 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 OR13D1Q8NGV5 346 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 NANPQ8TBE9 248 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 GPX8Q8TED1 209 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 GALMQ96C23 342 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 ABHD1Q96SE0 405 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 CLEC7AQ9BXN2 247 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 HEXA-AS1Q9H8Q6 139 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 RABL2AQ9UBK7 228 aaPredicted RBP12.51□□□□□ -0.41
SEC13-215ENST00000477547 JPT1Q9UK76 154 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 RABL2BQ9UNT1 228 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 V9GYH0 126 aa12.51□□□□□ -0.41
SEC13-215ENST00000477547 IGKV1D-8A0A087WSZ0 117 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms