RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 A0A1W2PR64 198 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 A0A1W2PRV1 198 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 E9PLN8 166 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 H0YIZ8 118 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 CYTIPO60759 359 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 RHBDL1O75783 438 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 ACTL6AO96019 429 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 ZNF708P17019 499 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 NPBWR1P48145 328 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 EIF2S3LQ2VIR3 472 aaKnown RBP9.49□□□□□ -0.89
COL27A1-204ENST00000477421 SH3BGRL3Q9H299 93 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 OR2W1Q9Y3N9 320 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 NCOA6Q14686 2063 aaPredicted RBP9.49□□□□□ -0.89
COL27A1-204ENST00000477421 IGHV3OR15-7A0A075B7D8 119 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 C9orf172C9J069 976 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 SYNGR2O43760 224 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 FGF12P61328 243 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 RPL19P84098 196 aaKnown RBP9.49□□□□□ -0.89
COL27A1-204ENST00000477421 SLC25A53Q5H9E4 307 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 MALSU1Q96EH3 234 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 SAT2Q96F10 170 aaPredicted RBP9.49□□□□□ -0.89
COL27A1-204ENST00000477421 TP53RKQ96S44 253 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 COL4A3Q01955 1670 aa9.49□□□□□ -0.89
COL27A1-204ENST00000477421 HAND1O96004 215 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 CD8AP01732 235 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 HKR1P10072 659 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 FGF7P21781 194 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 G6PCP35575 357 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 RAB5CP51148 216 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 RPP30P78346 268 aaKnown RBP9.48□□□□□ -0.89
COL27A1-204ENST00000477421 ZNF273Q14593 569 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 LYG1Q8N1E2 194 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 PINX1Q96BK5 328 aaKnown RBP9.48□□□□□ -0.89
COL27A1-204ENST00000477421 S1PR3Q99500 378 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 SLC35B3Q9H1N7 401 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 CRYM-AS1A6NIL9 109 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 CYB5BO43169 146 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 S100A12P80511 92 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 FAM166AQ6J272 317 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 ZNF429Q86V71 674 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 Q8IYB0 196 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 TMEM252Q8N6L7 170 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 NRIP2Q9BQI9 281 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 MED13Q9UHV7 2174 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 LOC102723996A0A087X1L8 192 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 A0A1W2PPE2 198 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 A0A1W2PPH5 198 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 C7orf77A4D0Y5 90 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 KCNJ3P48549 501 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 ZFP36L1Q07352 338 aaKnown RBP9.48□□□□□ -0.89
COL27A1-204ENST00000477421 SLC38A11Q08AI6 406 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 GTF3C1Q12789 2109 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 FOXC1Q12948 553 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 TVP23CQ96ET8 276 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 ABHD14BQ96IU4 210 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 ZNF703Q9H7S9 590 aaPredicted RBP9.48□□□□□ -0.89
COL27A1-204ENST00000477421 OR1A1Q9P1Q5 309 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 hCG_38984A0A1B0GV85 526 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 C17orf112F2Z3M2 114 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 MKRN2OSH3BPM6 223 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 ST8SIA5O15466 376 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 DEDDO75618 318 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 NSUN5P2Q63ZY6 315 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 MYPOPQ86VE0 399 aaPredicted RBP9.48□□□□□ -0.89
COL27A1-204ENST00000477421 TMEM230Q96A57 120 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 CABLES2Q9BTV7 478 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 RSG1Q9BU20 258 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 NDRG3Q9UGV2 375 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 OSGIN2Q9Y236 505 aa9.48□□□□□ -0.89
COL27A1-204ENST00000477421 A0A1W2PPQ1 181 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 LOC390937A0A1W2PQ73 354 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 H7BYZ3 331 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 MT-CO2P00403 227 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 F2RP25116 425 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 ZNF818PQ6ZRF7 136 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 CCL17Q92583 94 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 KCNMB2Q9Y691 235 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 OBSL1O75147 1896 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 CRYBA1P05813 215 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 P2RY1P47900 373 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 SSTP61278 116 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 HLA-DRB3P79483 266 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 MOGAT3Q86VF5 341 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 FDCSPQ8NFU4 85 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 NANPQ8TBE9 248 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 EDARADDQ8WWZ3 215 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 CYYR1Q96J86 154 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 RAB40CQ96S21 281 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 OPN3Q9H1Y3 402 aaPredicted RBP9.47□□□□□ -0.89
COL27A1-204ENST00000477421 DLL3Q9NYJ7 618 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 TRGV8A0A0C4DH27 118 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 PPP1R2P9O14990 202 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 CDS2O95674 445 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 OR2H2O95918 312 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 MT-ND4LP03901 98 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 CYC1P08574 325 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 FGF2P09038 288 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 SLC25A6P12236 298 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 FAM214BQ7L5A3 538 aa9.47□□□□□ -0.89
COL27A1-204ENST00000477421 OR52L2PQ8NGH6 319 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms