RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 ETAA1Q9NY74 926 aa11.14□□□□□ -0.63
CACNA1C-224ENST00000465934 TRAPPC2LQ9UL33 140 aa11.14□□□□□ -0.63
CACNA1C-224ENST00000465934 ERGIC3Q9Y282 383 aa11.14□□□□□ -0.63
CACNA1C-224ENST00000465934 PEX16Q9Y5Y5 336 aa11.14□□□□□ -0.63
CACNA1C-224ENST00000465934 IGHV1-3A0A0C4DH29 117 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 PTGES3LE9PB15 166 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 ORC5O43913 435 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 PF4V1P10720 104 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 RCC1P18754 421 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 AQP4P55087 323 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 GABPB1Q06547 395 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 ZNF816Q0VGE8 651 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 ACSM3Q53FZ2 586 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 KHDC1LQ5JSQ8 128 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 C6orf141Q5SZD1 244 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 OR10K2Q6IF99 312 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 MOB3BQ86TA1 216 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 CDH26Q8IXH8 852 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 GAPTQ8N292 157 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 PRR18Q8N4B5 295 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 OR10V1Q8NGI7 309 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 OR52M1Q8NGK5 317 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 ST6GALNAC6Q969X2 333 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 MRPS24Q96EL2 167 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 TMED9Q9BVK6 235 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 SPACA1Q9HBV2 294 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 LINC00527Q9UJ94 153 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 LSM2Q9Y333 95 aaKnown RBP11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 TSSC4Q9Y5U2 329 aaPredicted RBP11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 NOTCH3Q9UM47 2321 aa11.13□□□□□ -0.63
CACNA1C-224ENST00000465934 UBE2QL1A1L167 161 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 LINC01548A6NM66 108 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 ZNF736B4DX44 427 aaPredicted RBP11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 HBZP02008 142 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 GAPDHP04406 335 aaKnown RBP11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 IGLL1P15814 213 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 ZNF134P52741 427 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 GPR50Q13585 617 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 UNQ9370/PRO34162Q6UXP9 181 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 Q6ZPA2 131 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 LRRTM1Q86UE6 522 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 LINC00311Q8N616 119 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 NKAIN3Q8N8D7 197 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 ZNF439Q8NDP4 499 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 OR4X2Q8NGF9 303 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 RTN4IP1Q8WWV3 396 aaPredicted RBP11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 PHF21AQ96BD5 680 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 EAF1Q96JC9 268 aaPredicted RBP11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 UQCC2Q9BRT2 126 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 MND1Q9BWT6 205 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 VCXQ9H320 206 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 KCNK15Q9H427 330 aa11.12□□□□□ -0.63
CACNA1C-224ENST00000465934 PSMB11A5LHX3 300 aa11.11□□□□□ -0.63
CACNA1C-224ENST00000465934 SC5DO75845 299 aa11.11□□□□□ -0.63
CACNA1C-224ENST00000465934 MPIG6BO95866 241 aa11.11□□□□□ -0.63
CACNA1C-224ENST00000465934 MAPK3P27361 379 aaPredicted RBP11.11□□□□□ -0.63
CACNA1C-224ENST00000465934 EBI3Q14213 229 aa11.11□□□□□ -0.63
CACNA1C-224ENST00000465934 GNMTQ14749 295 aa11.11□□□□□ -0.63
CACNA1C-224ENST00000465934 CT45A1Q5HYN5 189 aa11.11□□□□□ -0.63
CACNA1C-224ENST00000465934 NKAPLQ5M9Q1 402 aa11.11□□□□□ -0.63
CACNA1C-224ENST00000465934 RNLSQ5VYX0 342 aa11.11□□□□□ -0.63
CACNA1C-224ENST00000465934 IZUMO1Q8IYV9 350 aa11.11□□□□□ -0.63
CACNA1C-224ENST00000465934 Q8N6K4 173 aa11.11□□□□□ -0.63
CACNA1C-224ENST00000465934 C8orf31Q8N9H6 132 aa11.11□□□□□ -0.63
CACNA1C-224ENST00000465934 WFDC9Q8NEX5 89 aa11.11□□□□□ -0.63
CACNA1C-224ENST00000465934 CT45A3Q8NHU0 189 aa11.11□□□□□ -0.63
CACNA1C-224ENST00000465934 DCLRE1BQ9H816 532 aa11.11□□□□□ -0.63
CACNA1C-224ENST00000465934 GNG12Q9UBI6 72 aa11.11□□□□□ -0.63
CACNA1C-224ENST00000465934 PLXNB1O43157 2135 aa11.11□□□□□ -0.63
CACNA1C-224ENST00000465934 FAM90A10PA6NDY2 464 aa11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 FAM90A7PA6NKC0 464 aa11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 SERPINE3A8MV23 424 aa11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 FAM90A23PA8MXZ1 464 aa11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 H0YHG0 523 aa11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 SPINT2O43291 252 aa11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 FGF16O43320 207 aa11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 PDCD6O75340 191 aa11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 CD33P20138 364 aa11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 FUT3P21217 361 aa11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 IRF3Q14653 427 aa11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 SPHARQ15513 63 aa11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 MED22Q15528 200 aa11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 RBM48Q5RL73 367 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 C6orf183Q5T699 404 aa11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 SLC25A48Q6ZT89 311 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 C18orf65Q6ZTR6 163 aa11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 MRPL30Q8TCC3 161 aaKnown RBP11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 TAF9BQ9HBM6 251 aa11.1□□□□□ -0.63
CACNA1C-224ENST00000465934 NCBP2LA6PVI3 153 aaKnown RBP11.09□□□□□ -0.63
CACNA1C-224ENST00000465934 IGHG2P01859 326 aa11.09□□□□□ -0.63
CACNA1C-224ENST00000465934 PF4P02776 101 aa11.09□□□□□ -0.63
CACNA1C-224ENST00000465934 VSIG8P0DPA2 414 aa11.09□□□□□ -0.63
CACNA1C-224ENST00000465934 SLC35A2P78381 396 aa11.09□□□□□ -0.63
CACNA1C-224ENST00000465934 LIPKQ5VXJ0 399 aa11.09□□□□□ -0.63
CACNA1C-224ENST00000465934 FOXB2Q5VYV0 432 aa11.09□□□□□ -0.63
CACNA1C-224ENST00000465934 ETV3LQ6ZN32 361 aa11.09□□□□□ -0.63
CACNA1C-224ENST00000465934 CEACAM19Q7Z692 300 aa11.09□□□□□ -0.63
CACNA1C-224ENST00000465934 SLC35E3Q7Z769 313 aa11.09□□□□□ -0.63
CACNA1C-224ENST00000465934 MS4A15Q8N5U1 240 aa11.09□□□□□ -0.63
CACNA1C-224ENST00000465934 Q8N9W7 124 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms