RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 LTC4SQ16873 150 aa16.12■□□□□ 0.17
COL9A3-204ENST00000463487 PLAC9Q5JTB6 97 aa16.12■□□□□ 0.17
COL9A3-204ENST00000463487 OR9G1Q8NH87 305 aa16.12■□□□□ 0.17
COL9A3-204ENST00000463487 NDNFQ8TB73 568 aa16.12■□□□□ 0.17
COL9A3-204ENST00000463487 SSMEM1Q8WWF3 244 aa16.12■□□□□ 0.17
COL9A3-204ENST00000463487 DPAGT1Q9H3H5 408 aa16.12■□□□□ 0.17
COL9A3-204ENST00000463487 PRDM13Q9H4Q3 707 aa16.12■□□□□ 0.17
COL9A3-204ENST00000463487 TAF9BQ9HBM6 251 aa16.12■□□□□ 0.17
COL9A3-204ENST00000463487 AMMECR1Q9Y4X0 333 aaPredicted RBP16.12■□□□□ 0.17
COL9A3-204ENST00000463487 A0A075B6Q4 140 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 ODF3BA8MYP8 253 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 C12orf77C9JDV5 145 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 C15orf65H3BRN8 121 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 HBZP02008 142 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 GNB3P16520 340 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 RCC1P18754 421 aaPredicted RBP16.11■□□□□ 0.17
COL9A3-204ENST00000463487 HTR1DP28221 377 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 ARHGDIBP52566 201 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 PITPNAQ00169 270 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 TUSC1Q2TAM9 212 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 MOGAT2Q3SYC2 334 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 UBE2NLQ5JXB2 153 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 MZT2AQ6P582 158 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 BEND2Q8NDZ0 799 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 GALMQ96C23 342 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 MALSU1Q96EH3 234 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 GNG12Q9UBI6 72 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 JMJD1CQ15652 2540 aa16.11■□□□□ 0.17
COL9A3-204ENST00000463487 F2RL2O00254 374 aa16.1■□□□□ 0.17
COL9A3-204ENST00000463487 MFNGO00587 321 aa16.1■□□□□ 0.17
COL9A3-204ENST00000463487 GSTP1P09211 210 aaKnown RBP16.1■□□□□ 0.17
COL9A3-204ENST00000463487 Q3ZCU0 254 aa16.1■□□□□ 0.17
COL9A3-204ENST00000463487 Q6YL49 198 aa16.1■□□□□ 0.17
COL9A3-204ENST00000463487 LDLRAD3Q86YD5 345 aa16.1■□□□□ 0.17
COL9A3-204ENST00000463487 TMEM86BQ8N661 226 aa16.1■□□□□ 0.17
COL9A3-204ENST00000463487 SAMD12Q8N8I0 201 aa16.1■□□□□ 0.17
COL9A3-204ENST00000463487 OR5H6Q8NGV6 325 aa16.1■□□□□ 0.17
COL9A3-204ENST00000463487 S100A16Q96FQ6 103 aaKnown RBP16.1■□□□□ 0.17
COL9A3-204ENST00000463487 ZNF48Q96MX3 618 aaPredicted RBP16.1■□□□□ 0.17
COL9A3-204ENST00000463487 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.1■□□□□ 0.17
COL9A3-204ENST00000463487 POMT1Q9Y6A1 747 aa16.1■□□□□ 0.17
COL9A3-204ENST00000463487 MDFIC2A0A1B0GVS7 189 aa16.09■□□□□ 0.17
COL9A3-204ENST00000463487 FAM172BPA6NC97 362 aa16.09■□□□□ 0.17
COL9A3-204ENST00000463487 CCDC160A6NGH7 325 aa16.09■□□□□ 0.17
COL9A3-204ENST00000463487 RGS11O94810 467 aa16.09■□□□□ 0.17
COL9A3-204ENST00000463487 ZNF182P17025 639 aaPredicted RBP16.09■□□□□ 0.17
COL9A3-204ENST00000463487 GDNFP39905 211 aa16.09■□□□□ 0.17
COL9A3-204ENST00000463487 HTD2P86397 168 aa16.09■□□□□ 0.17
COL9A3-204ENST00000463487 CDNFQ49AH0 187 aa16.09■□□□□ 0.17
COL9A3-204ENST00000463487 STEAP3Q658P3 488 aa16.09■□□□□ 0.17
COL9A3-204ENST00000463487 ZFAND2BQ8WV99 257 aa16.09■□□□□ 0.17
COL9A3-204ENST00000463487 SLC25A38Q96DW6 304 aa16.09■□□□□ 0.17
COL9A3-204ENST00000463487 ABCG5Q9H222 651 aa16.09■□□□□ 0.17
COL9A3-204ENST00000463487 ZNF286AQ9HBT8 521 aa16.09■□□□□ 0.17
COL9A3-204ENST00000463487 GFOD1Q9NXC2 390 aa16.09■□□□□ 0.17
COL9A3-204ENST00000463487 ZNRD1Q9P1U0 126 aa16.09■□□□□ 0.17
COL9A3-204ENST00000463487 JPT1Q9UK76 154 aa16.09■□□□□ 0.17
COL9A3-204ENST00000463487 NF1P21359 2839 aa16.09■□□□□ 0.17
COL9A3-204ENST00000463487 DNAJC9-AS1A6NH13 148 aa16.08■□□□□ 0.16
COL9A3-204ENST00000463487 LEUTXA8MZ59 168 aa16.08■□□□□ 0.16
COL9A3-204ENST00000463487 CLDN34H7C241 214 aa16.08■□□□□ 0.16
COL9A3-204ENST00000463487 MNDAP41218 407 aa16.08■□□□□ 0.16
COL9A3-204ENST00000463487 KIR2DS4P43632 304 aa16.08■□□□□ 0.16
COL9A3-204ENST00000463487 GNG2P59768 71 aa16.08■□□□□ 0.16
COL9A3-204ENST00000463487 KIR2DS1Q14954 304 aa16.08■□□□□ 0.16
COL9A3-204ENST00000463487 HMGN3Q15651 99 aa16.08■□□□□ 0.16
COL9A3-204ENST00000463487 PNLIPRP3Q17RR3 467 aa16.08■□□□□ 0.16
COL9A3-204ENST00000463487 HLA-DRB5Q30154 266 aa16.08■□□□□ 0.16
COL9A3-204ENST00000463487 ZNF880Q6PDB4 577 aa16.08■□□□□ 0.16
COL9A3-204ENST00000463487 OR10X1Q8NGY0 326 aa16.08■□□□□ 0.16
COL9A3-204ENST00000463487 CMTM3Q96MX0 182 aa16.08■□□□□ 0.16
COL9A3-204ENST00000463487 HDHD3Q9BSH5 251 aaPredicted RBP16.08■□□□□ 0.16
COL9A3-204ENST00000463487 MMP28Q9H239 520 aa16.08■□□□□ 0.16
COL9A3-204ENST00000463487 Q9N2K0 584 aa16.08■□□□□ 0.16
COL9A3-204ENST00000463487 OR2S2Q9NQN1 319 aa16.08■□□□□ 0.16
COL9A3-204ENST00000463487 DPM3Q9P2X0 92 aa16.08■□□□□ 0.16
COL9A3-204ENST00000463487 SOX21Q9Y651 276 aaPredicted RBP16.08■□□□□ 0.16
COL9A3-204ENST00000463487 J3QR06 171 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 HOXA3O43365 443 aaPredicted RBP16.07■□□□□ 0.16
COL9A3-204ENST00000463487 VENTXO95231 258 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 IGLV1-47P01700 117 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 MELTFP08582 738 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 IL3RAP26951 378 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 GNG10P50151 68 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 HLA-DRB3P79483 266 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 AANATQ16613 207 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 KRTAP21-3Q3LHN1 58 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 HACD4Q5VWC8 232 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 OLFML2AQ68BL7 652 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 CCDC144NLQ6NUI1 221 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 BAIAP2L2Q6UXY1 529 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 C8orf31Q8N9H6 132 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 OR5R1Q8NH85 324 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 OR1L1Q8NH94 360 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 UBALD1Q8TB05 177 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 IL1F10Q8WWZ1 152 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 TMEM158Q8WZ71 300 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 ISOC1Q96CN7 298 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 MEGF9Q9H1U4 602 aa16.07■□□□□ 0.16
COL9A3-204ENST00000463487 ABCB10Q9NRK6 738 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms