RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 ALKBH3Q96Q83 286 aaPredicted RBP6.47□□□□□ -1.37
CPSF6-202ENST00000435070 KNTC1P50748 2209 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 CABIN1Q9Y6J0 2220 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 TRBV11-1A0A0K0K1C0 115 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 SLC22A20A6NK97 555 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 SHISA8B8ZZ34 492 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 M0QZ24 198 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 OR5G3P0C626 314 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 MFAP5Q13361 173 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 ARL6IP1Q15041 203 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 COA6Q5JTJ3 125 aaKnown RBP6.47□□□□□ -1.37
CPSF6-202ENST00000435070 UNQ5815/PRO19632Q6UWF5 114 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 DECR2Q9NUI1 292 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 ANAPC10Q9UM13 185 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 C17orf105B2RV13 164 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 PLPP3O14495 311 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 PITX3O75364 302 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 CER1O95813 267 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 UMODP07911 640 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 GPR3P46089 330 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 MEOX1P50221 254 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 KRTDAPP60985 99 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 RHOBP62745 196 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 LHX4Q969G2 390 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 ATP5SQ99766 215 aa6.47□□□□□ -1.37
CPSF6-202ENST00000435070 SOX21Q9Y651 276 aaPredicted RBP6.47□□□□□ -1.37
CPSF6-202ENST00000435070 CRXO43186 299 aaPredicted RBP6.46□□□□□ -1.37
CPSF6-202ENST00000435070 SPRY1O43609 319 aaPredicted RBP6.46□□□□□ -1.37
CPSF6-202ENST00000435070 LILRA1O75019 489 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 EFEMP2O95967 443 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 NTSR1P30989 418 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 OR1D4P47884 311 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 RPL23P62829 140 aaKnown RBP6.46□□□□□ -1.37
CPSF6-202ENST00000435070 ARL16Q0P5N6 197 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 SLC35E1Q96K37 410 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 Q9N2K0 584 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 OBP2BQ9NPH6 170 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 MANBALQ9NQG1 85 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 MAP1LC3B2A6NCE7 125 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 NXPH2O95156 264 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 EMP1P54849 157 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 GATAD1Q8WUU5 269 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 IMMP2LQ96T52 175 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 MAP1LC3BQ9GZQ8 125 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 CTDSP1Q9GZU7 261 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 FAM234AQ9H0X4 552 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 PCED1AQ9H1Q7 454 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 OR6C3Q9NZP0 311 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 VDAC3Q9Y277 283 aa6.46□□□□□ -1.37
CPSF6-202ENST00000435070 HINT1P49773 126 aaPredicted RBP6.46□□□□□ -1.38
CPSF6-202ENST00000435070 TAS2R30P59541 319 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 ACOT6Q3I5F7 207 aaPredicted RBP6.46□□□□□ -1.38
CPSF6-202ENST00000435070 LYG1Q8N1E2 194 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 OR4F5Q8NH21 305 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 CMTM2Q8TAZ6 248 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 OR4F4Q96R69 305 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 ANGPTL4Q9BY76 406 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 PARD6GQ9BYG4 376 aaPredicted RBP6.46□□□□□ -1.38
CPSF6-202ENST00000435070 TMEM242Q9NWH2 141 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 NAT8Q9UHE5 227 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 TBX21Q9UL17 535 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 ZNF737O75373 536 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 OR2J2O76002 312 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 CRIPAKQ8N1N5 446 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 ST6GALNAC3Q8NDV1 305 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 C18orf12Q96KH6 178 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 APOOQ9BUR5 198 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 TMEM9BQ9NQ34 198 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 SERPINE3A8MV23 424 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 IAPPP10997 89 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 IL24Q13007 206 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 Q6ZSR6 202 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 OR4D5Q8NGN0 318 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 NECAP2Q9NVZ3 263 aa6.46□□□□□ -1.38
CPSF6-202ENST00000435070 NCOA6Q14686 2063 aaPredicted RBP6.46□□□□□ -1.38
CPSF6-202ENST00000435070 ETV2O00321 342 aaPredicted RBP6.45□□□□□ -1.38
CPSF6-202ENST00000435070 TNFRSF10CO14798 259 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 HNRNPA1P09651 372 aaKnown RBP eCLIP6.45□□□□□ -1.38
CPSF6-202ENST00000435070 HNRNPA2B1P22626 353 aaKnown RBP6.45□□□□□ -1.38
CPSF6-202ENST00000435070 AADACP22760 399 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 SLC6A8P48029 635 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 KIR2DS3Q14952 304 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 SHHQ15465 462 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 TMEM183BQ1AE95 376 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 Q6ZWC4 215 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 ALKBH7Q9BT30 221 aaPredicted RBP6.45□□□□□ -1.38
CPSF6-202ENST00000435070 TMEM106BQ9NUM4 274 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 SDK2Q58EX2 2172 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 E9PLN8 166 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 TNFSF13O75888 250 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 HRASP01112 189 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 SUMO1P63165 101 aaKnown RBP6.45□□□□□ -1.38
CPSF6-202ENST00000435070 GRINAQ7Z429 371 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 RLN3Q8WXF3 142 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 CISD1Q9NZ45 108 aaKnown RBP6.45□□□□□ -1.38
CPSF6-202ENST00000435070 WNT16Q9UBV4 365 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 TCFL5Q9UL49 500 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 FAM166BA8MTA8 275 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 ZNF732B4DXR9 585 aa6.45□□□□□ -1.38
CPSF6-202ENST00000435070 DEFA4P12838 97 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms