RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 DCAF12L2Q5VW00 463 aa8.34□□□□□ -1.07
CMSS1-201ENST00000421999 FDX2Q6P4F2 183 aa8.34□□□□□ -1.07
CMSS1-201ENST00000421999 Q6ZNX1 250 aa8.34□□□□□ -1.07
CMSS1-201ENST00000421999 CCDC28AQ8IWP9 274 aa8.34□□□□□ -1.07
CMSS1-201ENST00000421999 VSTM2AQ8TAG5 236 aa8.34□□□□□ -1.07
CMSS1-201ENST00000421999 NANPQ8TBE9 248 aa8.34□□□□□ -1.07
CMSS1-201ENST00000421999 NAV2Q8IVL1 2488 aa8.34□□□□□ -1.07
CMSS1-201ENST00000421999 IGKV3D-15A0A087WSY6 115 aa8.34□□□□□ -1.07
CMSS1-201ENST00000421999 TGFAP01135 160 aa8.34□□□□□ -1.07
CMSS1-201ENST00000421999 PPYP01298 95 aa8.34□□□□□ -1.07
CMSS1-201ENST00000421999 HLA-DRB3P79483 266 aa8.34□□□□□ -1.07
CMSS1-201ENST00000421999 OPCMLQ14982 345 aa8.34□□□□□ -1.07
CMSS1-201ENST00000421999 CCL28Q9NRJ3 127 aa8.34□□□□□ -1.07
CMSS1-201ENST00000421999 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.34□□□□□ -1.07
CMSS1-201ENST00000421999 LPAR3Q9UBY5 353 aa8.34□□□□□ -1.07
CMSS1-201ENST00000421999 OR5H14A6NHG9 310 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 A8MXE2 369 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 ARG1P05089 322 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 CORO2AQ92828 525 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 GINS3Q9BRX5 216 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 TMEM106BQ9NUM4 274 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 CACNG5Q9UF02 275 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 MIOXQ9UGB7 285 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 ATG2AQ2TAZ0 1938 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 TRIOO75962 3097 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 IFNL4K9M1U5 179 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 OR7C2O60412 319 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 KIR2DL2P43627 348 aaPredicted RBP8.33□□□□□ -1.08
CMSS1-201ENST00000421999 LGALS7P47929 136 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 IL13RA2Q14627 380 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 UBE2V2Q15819 145 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 ACSM6Q6P461 480 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 UNQ9370/PRO34162Q6UXP9 181 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 ZNRF1Q8ND25 227 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 OR2G3Q8NGZ4 309 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 FLYWCH2Q96CP2 140 aaKnown RBP8.33□□□□□ -1.08
CMSS1-201ENST00000421999 NEIL1Q96FI4 390 aaPredicted RBP8.33□□□□□ -1.08
CMSS1-201ENST00000421999 MEGF10Q96KG7 1140 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 SNX22Q96L94 193 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 C2orf50Q96LR7 162 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 PIPOXQ9P0Z9 390 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 LOC105371242A0A075B767 164 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 TRBV5-7A0A0A0MS05 114 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 F8W036 122 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 LANCL1O43813 399 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 FOXH1O75593 365 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 OR5AC1P0C628 307 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 ARL3P36405 182 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 ZNF154Q13106 437 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 FAM209AQ5JX71 171 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 CDH26Q8IXH8 852 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 PXT1Q8NFP0 134 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 OR10S1Q8NGN2 331 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 PCNPQ8WW12 178 aaKnown RBP8.33□□□□□ -1.08
CMSS1-201ENST00000421999 UHRF2Q96PU4 802 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 SH2D2AQ9NP31 389 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 CACFD1Q9UGQ2 172 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 C3orf85A0A1B0GTC6 90 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 ODAMA1E959 279 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 ZNF320A2RRD8 509 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 RPL36A-HNRNPH2H7BZ11 118 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 J3QW42 95 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 K7EM74 188 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 GOSR1O95249 250 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 SSTP61278 116 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 TMEM267Q0VDI3 215 aaPredicted RBP8.33□□□□□ -1.08
CMSS1-201ENST00000421999 SFT2D1Q8WV19 159 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 SEBOXQ9HB31 216 aaPredicted RBP8.33□□□□□ -1.08
CMSS1-201ENST00000421999 COA4Q9NYJ1 87 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 V9GYH0 126 aa8.33□□□□□ -1.08
CMSS1-201ENST00000421999 TRBV23-1A0A0A0MS06 115 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 J3QRE1 110 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 K7N7A8 449 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 ERVH48-1M5A8F1 160 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 ETV2O00321 342 aaPredicted RBP8.32□□□□□ -1.08
CMSS1-201ENST00000421999 WNT9BO14905 357 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 IGHG3P01860 377 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 DAOP14920 347 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 FSTP19883 344 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 ACKR3P25106 362 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 NPBWR2P48146 333 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 SSX2Q16385 188 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 ECSCRQ19T08 205 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 GAPTQ8N292 157 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 PPP1R1CQ8WVI7 109 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 BOLA1Q9Y3E2 137 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 A0A1W2PN81 502 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 E5RGE8 158 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 F6UZH7 168 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 RPL12P30050 165 aaKnown RBP8.32□□□□□ -1.08
CMSS1-201ENST00000421999 CHRNA7P36544 502 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 PPP1R1AQ13522 171 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 ST6GALNAC3Q8NDV1 305 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 STARD4Q96DR4 205 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 MARS2Q96GW9 593 aaKnown RBP8.32□□□□□ -1.08
CMSS1-201ENST00000421999 PKIBQ9C010 78 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 MLXQ9UH92 298 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 NSG2Q9Y328 171 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 KIAA2026Q5HYC2 2103 aa8.32□□□□□ -1.08
CMSS1-201ENST00000421999 NAV3Q8IVL0 2385 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms