RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 NDUFB7P17568 137 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 TAS2R31P59538 309 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 FXYD4P59646 89 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 HERV-K104P61576 105 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 CBX3Q13185 183 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 CARTPTQ16568 116 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 CR1LQ2VPA4 569 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 TMEM155Q4W5P6 130 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 C4orf46Q504U0 113 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 LRRC10Q5BKY1 277 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 METTL11BQ5VVY1 283 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 ZNF626Q68DY1 528 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 FAHD2BQ6P2I3 314 aaPredicted RBP5.51□□□□□ -1.53
VPS41-204ENST00000413141 SLC25A42Q86VD7 318 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 ZNF295-AS1Q8N0V1 137 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 ADAD2Q8NCV1 583 aaKnown RBP5.51□□□□□ -1.53
VPS41-204ENST00000413141 OR52B4Q8NGK2 314 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 OR10J5Q8NHC4 309 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 CAPSLQ8WWF8 208 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 RAB1CQ92928 201 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 TOMM40LQ969M1 308 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 TMEM230Q96A57 120 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 DACT3Q96B18 629 aaPredicted RBP5.51□□□□□ -1.53
VPS41-204ENST00000413141 GALMQ96C23 342 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 FAHD2AQ96GK7 314 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 TIMD4Q96H15 378 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 SCGB3A2Q96PL1 93 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 ALX4Q9H161 411 aaPredicted RBP5.51□□□□□ -1.53
VPS41-204ENST00000413141 C5orf66Q9H5L9 145 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 C19orf12Q9NSK7 152 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 CALYQ9NYX4 217 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 OR6C3Q9NZP0 311 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 ZNF69Q9UC07 566 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 SLC23A1Q9UHI7 598 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 OPN4Q9UHM6 478 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 GPR132Q9UNW8 380 aa5.51□□□□□ -1.53
VPS41-204ENST00000413141 TRGV10A0A0A0MS01 117 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 IGKV1D-13A0A0B4J2D9 117 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 hADV38S2A0JD32 116 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 FAM172BPA6NC97 362 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 SNRPGP15A8MWD9 76 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 F5H0A9 414 aaPredicted RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 F2RL2O00254 374 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 SPINT2O43291 252 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 HSPA12AO43301 675 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 CREBL2O60519 120 aaPredicted RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 PFDN1O60925 122 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 HLA-AP01891 365 aaKnown RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 HEXAP06865 529 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 CTSDP07339 412 aaPredicted RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 CGB3P0DN86 165 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 CGB7P0DN87 165 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 IGKV1-13P0DP09 117 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 PI3P19957 117 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 GZMHP20718 246 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 ZBTB25P24278 435 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 IL2RGP31785 369 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 GPR6P46095 362 aaPredicted RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 UCP3P55916 312 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 TMEM33P57088 247 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 UBE2MP61081 183 aaKnown RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 RRAS2P62070 204 aaPredicted RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 RPL31P62899 125 aaKnown RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 HTD2P86397 168 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 MEF2CQ06413 473 aaPredicted RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 DHRS2Q13268 280 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 PPP1R1AQ13522 171 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 ZNF273Q14593 569 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 GNMTQ14749 295 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 C17orf58Q2M2W7 97 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 ZNF841Q6ZN19 808 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 AKAP14Q86UN6 197 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 LDLRAD3Q86YD5 345 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 SLC38A6Q8IZM9 456 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 SPICQ8N5J4 248 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 ZNF525Q8N782 197 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 ZNF565Q8N9K5 539 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 OR8B3Q8NGG8 313 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 OR52L2PQ8NGH6 319 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 ZFAND1Q8TCF1 268 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 ZNF431Q8TF32 576 aaPredicted RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 CORO2AQ92828 525 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 ARL11Q969Q4 196 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 ZNF486Q96H40 463 aaPredicted RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 OR8B2Q96RD0 313 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 RTBDNQ9BSG5 229 aaPredicted RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 RSRP1Q9BUV0 290 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 TOLLIPQ9H0E2 274 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 PARP12Q9H0J9 701 aaKnown RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 OR51J1Q9H342 316 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 GPN1Q9HCN4 374 aaPredicted RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 RDH8Q9NYR8 311 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 LPAR3Q9UBY5 353 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 JPT1Q9UK76 154 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 C14orf166Q9Y224 244 aaKnown RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 UBE2J1Q9Y385 318 aaPredicted RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 OR2W1Q9Y3N9 320 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 LINC00312Q9Y6C7 94 aa5.5□□□□□ -1.53
VPS41-204ENST00000413141 UTP20O75691 2785 aaKnown RBP5.5□□□□□ -1.53
VPS41-204ENST00000413141 LRBAP50851 2863 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms