RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 VCXQ9H320 206 aa15.3■□□□□ 0.04
SMARCB1-204ENST00000407422 ETAA1Q9NY74 926 aa15.3■□□□□ 0.04
SMARCB1-204ENST00000407422 PEX16Q9Y5Y5 336 aa15.3■□□□□ 0.04
SMARCB1-204ENST00000407422 IGHV3-72A0A0B4J1Y9 119 aa15.29■□□□□ 0.04
SMARCB1-204ENST00000407422 IGHV1-3A0A0C4DH29 117 aa15.29■□□□□ 0.04
SMARCB1-204ENST00000407422 ZNF816Q0VGE8 651 aaPredicted RBP15.29■□□□□ 0.04
SMARCB1-204ENST00000407422 SIGIRRQ6IA17 410 aa15.29■□□□□ 0.04
SMARCB1-204ENST00000407422 MOB3BQ86TA1 216 aa15.29■□□□□ 0.04
SMARCB1-204ENST00000407422 FAM46BQ96A09 425 aa15.29■□□□□ 0.04
SMARCB1-204ENST00000407422 DCLRE1BQ9H816 532 aa15.29■□□□□ 0.04
SMARCB1-204ENST00000407422 TRAPPC2LQ9UL33 140 aa15.29■□□□□ 0.04
SMARCB1-204ENST00000407422 TSSC4Q9Y5U2 329 aaPredicted RBP15.29■□□□□ 0.04
SMARCB1-204ENST00000407422 SLC31A2O15432 143 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 RCC1P18754 421 aaPredicted RBP15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 MAPK3P27361 379 aaPredicted RBP15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 ACSM3Q53FZ2 586 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 C6orf141Q5SZD1 244 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 GAPTQ8N292 157 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 PRR18Q8N4B5 295 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 LINC00311Q8N616 119 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 NKAIN3Q8N8D7 197 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 OR4X2Q8NGF9 303 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 NRG4Q8WWG1 115 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 Q96M66 194 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 NOL4LQ96MY1 436 aaPredicted RBP15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 UQCC2Q9BRT2 126 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 UBE2QL1A1L167 161 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 GAPDHP04406 335 aaKnown RBP15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 PF4V1P10720 104 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 ZNF134P52741 427 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 RNLSQ5VYX0 342 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 UNQ9370/PRO34162Q6UXP9 181 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 ZNF329Q86UD4 541 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 C8orf31Q8N9H6 132 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 OR1L1Q8NH94 360 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 ST6GALNAC6Q969X2 333 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 RBMXL1Q96E39 390 aaKnown RBP15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 TMED9Q9BVK6 235 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 MND1Q9BWT6 205 aa15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 LSM2Q9Y333 95 aaKnown RBP15.28■□□□□ 0.04
SMARCB1-204ENST00000407422 HBZP02008 142 aa15.27■□□□□ 0.03
SMARCB1-204ENST00000407422 FUT3P21217 361 aa15.27■□□□□ 0.03
SMARCB1-204ENST00000407422 AQP4P55087 323 aa15.27■□□□□ 0.03
SMARCB1-204ENST00000407422 GPR50Q13585 617 aa15.27■□□□□ 0.03
SMARCB1-204ENST00000407422 KHDC1LQ5JSQ8 128 aa15.27■□□□□ 0.03
SMARCB1-204ENST00000407422 C5orf24Q7Z6I8 188 aa15.27■□□□□ 0.03
SMARCB1-204ENST00000407422 OR10V1Q8NGI7 309 aa15.27■□□□□ 0.03
SMARCB1-204ENST00000407422 RTN4IP1Q8WWV3 396 aaPredicted RBP15.27■□□□□ 0.03
SMARCB1-204ENST00000407422 THRSPQ92748 146 aa15.27■□□□□ 0.03
SMARCB1-204ENST00000407422 EAF1Q96JC9 268 aaPredicted RBP15.27■□□□□ 0.03
SMARCB1-204ENST00000407422 PSMB11A5LHX3 300 aa15.26■□□□□ 0.03
SMARCB1-204ENST00000407422 FAM90A10PA6NDY2 464 aa15.26■□□□□ 0.03
SMARCB1-204ENST00000407422 FAM90A7PA6NKC0 464 aa15.26■□□□□ 0.03
SMARCB1-204ENST00000407422 FAM90A23PA8MXZ1 464 aa15.26■□□□□ 0.03
SMARCB1-204ENST00000407422 SPINT2O43291 252 aa15.26■□□□□ 0.03
SMARCB1-204ENST00000407422 FGF16O43320 207 aa15.26■□□□□ 0.03
SMARCB1-204ENST00000407422 SC5DO75845 299 aa15.26■□□□□ 0.03
SMARCB1-204ENST00000407422 EBI3Q14213 229 aa15.26■□□□□ 0.03
SMARCB1-204ENST00000407422 SPHARQ15513 63 aa15.26■□□□□ 0.03
SMARCB1-204ENST00000407422 OR10K2Q6IF99 312 aa15.26■□□□□ 0.03
SMARCB1-204ENST00000407422 LRRTM1Q86UE6 522 aa15.26■□□□□ 0.03
SMARCB1-204ENST00000407422 ZNF439Q8NDP4 499 aa15.26■□□□□ 0.03
SMARCB1-204ENST00000407422 WFDC9Q8NEX5 89 aa15.26■□□□□ 0.03
SMARCB1-204ENST00000407422 GNG12Q9UBI6 72 aa15.26■□□□□ 0.03
SMARCB1-204ENST00000407422 LINC00527Q9UJ94 153 aa15.26■□□□□ 0.03
SMARCB1-204ENST00000407422 ZNF736B4DX44 427 aaPredicted RBP15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 H0YHG0 523 aa15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 IGLL1P15814 213 aa15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 CD33P20138 364 aa15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 CT45A1Q5HYN5 189 aa15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 C6orf183Q5T699 404 aa15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 SLC25A48Q6ZT89 311 aaKnown RBP15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 MS4A15Q8N5U1 240 aa15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 Q8N6K4 173 aa15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 CT45A3Q8NHU0 189 aa15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 PHF21AQ96BD5 680 aa15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 LINC01548A6NM66 108 aa15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 PDCD6O75340 191 aa15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 MPIG6BO95866 241 aa15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 MED22Q15528 200 aa15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 IZUMO1Q8IYV9 350 aa15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 KCNK15Q9H427 330 aa15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 TAF9BQ9HBM6 251 aa15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 GHRLQ9UBU3 117 aa15.25■□□□□ 0.03
SMARCB1-204ENST00000407422 NCBP2LA6PVI3 153 aaKnown RBP15.24■□□□□ 0.03
SMARCB1-204ENST00000407422 SERPINE3A8MV23 424 aa15.24■□□□□ 0.03
SMARCB1-204ENST00000407422 CA11O75493 328 aa15.24■□□□□ 0.03
SMARCB1-204ENST00000407422 PF4P02776 101 aa15.24■□□□□ 0.03
SMARCB1-204ENST00000407422 GLAP06280 429 aa15.24■□□□□ 0.03
SMARCB1-204ENST00000407422 VSIG8P0DPA2 414 aa15.24■□□□□ 0.03
SMARCB1-204ENST00000407422 IL3RAP26951 378 aa15.24■□□□□ 0.03
SMARCB1-204ENST00000407422 SLC35A2P78381 396 aa15.24■□□□□ 0.03
SMARCB1-204ENST00000407422 IRF3Q14653 427 aa15.24■□□□□ 0.03
SMARCB1-204ENST00000407422 Q3ZCU0 254 aa15.24■□□□□ 0.03
SMARCB1-204ENST00000407422 NKAPLQ5M9Q1 402 aa15.24■□□□□ 0.03
SMARCB1-204ENST00000407422 RBM48Q5RL73 367 aaKnown RBP15.24■□□□□ 0.03
SMARCB1-204ENST00000407422 Q6ZPA2 131 aa15.24■□□□□ 0.03
SMARCB1-204ENST00000407422 CEACAM19Q7Z692 300 aa15.24■□□□□ 0.03
SMARCB1-204ENST00000407422 MRPL30Q8TCC3 161 aaKnown RBP15.24■□□□□ 0.03
SMARCB1-204ENST00000407422 CST11Q9H112 138 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms