RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 RND3P61587 244 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 SRPXP78539 464 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 PEAR1Q5VY43 1037 aaPredicted RBP4.96□□□□□ -1.62
RFFL-202ENST00000394597 DMBX1Q8NFW5 382 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 OR5C1Q8NGR4 320 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 OR1F12Q8NHA8 337 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 ZPLD1Q8TCW7 415 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 FGF11Q92914 225 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 NTNG2Q96CW9 530 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 SLC35E1Q96K37 410 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 ADGRG7Q96K78 797 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 UCN2Q96RP3 112 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 HSPB9Q9BQS6 159 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 NCOR1P1Q9H4R4 102 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 MYOZ1Q9NP98 299 aaPredicted RBP4.96□□□□□ -1.62
RFFL-202ENST00000394597 FANCMQ8IYD8 2048 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 C17orf51A8MQB3 221 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 C9orf172C9J069 976 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 MS4A18H0YCH9 400 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 TRAPPC2LH3BP13 241 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 H3BP45 60 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 ANGPTL7O43827 346 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 KLF7O75840 302 aaPredicted RBP4.96□□□□□ -1.62
RFFL-202ENST00000394597 MT-CO2P00403 227 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 GSTP1P09211 210 aaKnown RBP4.96□□□□□ -1.62
RFFL-202ENST00000394597 AADACP22760 399 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 RPL24P83731 157 aaKnown RBP4.96□□□□□ -1.62
RFFL-202ENST00000394597 MS4A18Q3C1V0 323 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 OR2C3Q8N628 320 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 OR51A2Q8NGJ7 313 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 REEP6Q96HR9 211 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 TTTY12Q9BZ98 90 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 ZNF286AQ9HBT8 521 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 NAT8Q9UHE5 227 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 STARD10Q9Y365 291 aa4.96□□□□□ -1.62
RFFL-202ENST00000394597 CHCHD2Q9Y6H1 151 aaPredicted RBP4.96□□□□□ -1.62
RFFL-202ENST00000394597 SPTBN1Q01082 2364 aaKnown RBP4.95□□□□□ -1.62
RFFL-202ENST00000394597 SCN8AQ9UQD0 1980 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 DUXBA0A1W2PPF3 345 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 C5orf49A4QMS7 147 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 DIRC3C9JPN6 131 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 F8VVB4 439 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 F8VWA3 439 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 H0Y8G0 127 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 ONECUT2O95948 504 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 FCGR3AP08637 254 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 CXCL1P09341 107 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 DANCRP0C864 163 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 HKR1P10072 659 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 BMP5P22003 454 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 FGF8P55075 233 aaPredicted RBP4.95□□□□□ -1.62
RFFL-202ENST00000394597 UBE2G2P60604 165 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 RAB35Q15286 201 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 ELOBQ15370 118 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 BIVMQ86UB2 503 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 PIGTQ969N2 578 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 PCGF1Q9BSM1 259 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 ZNF430Q9H8G1 570 aaPredicted RBP4.95□□□□□ -1.62
RFFL-202ENST00000394597 PLEKHF2Q9H8W4 249 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 OBP2BQ9NPH6 170 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 UQCR10Q9UDW1 63 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 ZNF107Q9UII5 783 aaPredicted RBP4.95□□□□□ -1.62
RFFL-202ENST00000394597 KLK13Q9UKR3 277 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 RNF150Q9ULK6 438 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 LRRK1Q38SD2 2015 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 PIGBOS1A0A0B4J2F0 54 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 A0A1B0GTI1 187 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 AMBPP02760 352 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 CD1AP06126 327 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 CD99P14209 185 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 CSRP1P21291 193 aaKnown RBP4.95□□□□□ -1.62
RFFL-202ENST00000394597 DTYMKP23919 212 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 ATP6V0CP27449 155 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 EFNA3P52797 238 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 FNDC7Q5VTL7 733 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 ZNF573Q86YE8 665 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 NUDT10Q8NFP7 164 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 WBP1Q96G27 269 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 GINS3Q9BRX5 216 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 SLC2A8Q9NY64 477 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 IL19Q9UHD0 177 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 LY6G6EA0A0G2JKS1 128 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 ZNF816-ZNF321PA0A0X1KG74 233 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 KIAA1324LA8MWY0 1029 aaPredicted RBP4.95□□□□□ -1.62
RFFL-202ENST00000394597 HSBP1O75506 76 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 LYPD3O95274 346 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 HSPB1P04792 205 aaKnown RBP4.95□□□□□ -1.62
RFFL-202ENST00000394597 GZMBP10144 247 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 FUT3P21217 361 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 GAS1P54826 345 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 RPS4XP62701 263 aaKnown RBP4.95□□□□□ -1.62
RFFL-202ENST00000394597 COL10A1Q03692 680 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 ZNF468Q5VIY5 522 aaPredicted RBP4.95□□□□□ -1.62
RFFL-202ENST00000394597 ZNF774Q6NX45 483 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 UNQ6494/PRO21346Q6UXR6 183 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 C16orf82Q7Z2V1 217 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 OR4B1Q8NGF8 309 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 PSMF1Q92530 271 aa4.95□□□□□ -1.62
RFFL-202ENST00000394597 MRPL24Q96A35 216 aaKnown RBP4.95□□□□□ -1.62
RFFL-202ENST00000394597 MIEN1Q9BRT3 115 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms