RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 SULT1A2P50226 295 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 Q6ZS92 163 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 ZNF826PQ6ZT77 177 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 BEND4Q6ZU67 534 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 OR10V1Q8NGI7 309 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 OR51H1Q8NH63 302 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 MBD3L2Q8NHZ7 208 aaPredicted RBP17.09■□□□□ 0.33
VSX1-202ENST00000376709 CXXC4Q9H2H0 198 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 TUBG2Q9NRH3 451 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 IGLV1-44P01699 117 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 ADCYAP1P18509 176 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 ATF4P18848 351 aaPredicted RBP17.09■□□□□ 0.33
VSX1-202ENST00000376709 NHLH2Q02577 135 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 ZNF718Q3SXZ3 478 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 IL34Q6ZMJ4 242 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 SEM1Q6ZVN7 128 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 UBALD1Q8TB05 177 aa17.09■□□□□ 0.33
VSX1-202ENST00000376709 RBM7Q9Y580 266 aaKnown RBP17.09■□□□□ 0.33
VSX1-202ENST00000376709 HEATR1Q9H583 2144 aaKnown RBP17.09■□□□□ 0.33
VSX1-202ENST00000376709 ATMQ13315 3056 aa17.08■□□□□ 0.33
VSX1-202ENST00000376709 IGHV2OR16-5A0A0B4J2B6 119 aa17.08■□□□□ 0.33
VSX1-202ENST00000376709 IGHV1-18A0A0C4DH31 117 aa17.08■□□□□ 0.33
VSX1-202ENST00000376709 TMEM218A2RU14 115 aa17.08■□□□□ 0.33
VSX1-202ENST00000376709 OR5H1A6NKK0 313 aa17.08■□□□□ 0.33
VSX1-202ENST00000376709 PROB1E7EW31 1015 aa17.08■□□□□ 0.33
VSX1-202ENST00000376709 LPAR6P43657 344 aa17.08■□□□□ 0.33
VSX1-202ENST00000376709 CAV2P51636 162 aa17.08■□□□□ 0.33
VSX1-202ENST00000376709 POLR2GP62487 172 aaKnown RBP eCLIP17.08■□□□□ 0.33
VSX1-202ENST00000376709 NMSQ5H8A3 153 aa17.08■□□□□ 0.33
VSX1-202ENST00000376709 TMEM231Q9H6L2 316 aa17.08■□□□□ 0.33
VSX1-202ENST00000376709 HES4Q9HCC6 221 aa17.08■□□□□ 0.33
VSX1-202ENST00000376709 MSL2Q9HCI7 577 aa17.08■□□□□ 0.33
VSX1-202ENST00000376709 SSSCA1O60232 199 aa17.08■□□□□ 0.32
VSX1-202ENST00000376709 SERPINE2P07093 398 aa17.08■□□□□ 0.32
VSX1-202ENST00000376709 ACAA1P09110 424 aaPredicted RBP17.08■□□□□ 0.32
VSX1-202ENST00000376709 KITLGP21583 273 aa17.08■□□□□ 0.32
VSX1-202ENST00000376709 OR2C3Q8N628 320 aa17.08■□□□□ 0.32
VSX1-202ENST00000376709 RBMXL3Q8N7X1 1067 aaKnown RBP17.08■□□□□ 0.32
VSX1-202ENST00000376709 IL22RA2Q969J5 263 aa17.08■□□□□ 0.32
VSX1-202ENST00000376709 WNT9BO14905 357 aa17.07■□□□□ 0.32
VSX1-202ENST00000376709 BLOC1S1P78537 153 aa17.07■□□□□ 0.32
VSX1-202ENST00000376709 PJVKQ0ZLH3 352 aa17.07■□□□□ 0.32
VSX1-202ENST00000376709 FOXC1Q12948 553 aa17.07■□□□□ 0.32
VSX1-202ENST00000376709 SWI5Q1ZZU3 235 aa17.07■□□□□ 0.32
VSX1-202ENST00000376709 ALKBH2Q6NS38 261 aa17.07■□□□□ 0.32
VSX1-202ENST00000376709 MAGT1Q9H0U3 335 aa17.07■□□□□ 0.32
VSX1-202ENST00000376709 MBNL3Q9NUK0 354 aaKnown RBP17.07■□□□□ 0.32
VSX1-202ENST00000376709 UFSP2Q9NUQ7 469 aa17.07■□□□□ 0.32
VSX1-202ENST00000376709 PLA2G2EQ9NZK7 142 aa17.07■□□□□ 0.32
VSX1-202ENST00000376709 ATG12O94817 140 aa17.06■□□□□ 0.32
VSX1-202ENST00000376709 TESK1Q15569 626 aa17.06■□□□□ 0.32
VSX1-202ENST00000376709 CXorf66Q5JRM2 361 aaPredicted RBP17.06■□□□□ 0.32
VSX1-202ENST00000376709 PRAMEF6Q5VXH4 476 aa17.06■□□□□ 0.32
VSX1-202ENST00000376709 C11orf53Q8IXP5 236 aa17.06■□□□□ 0.32
VSX1-202ENST00000376709 NKX6-2Q9C056 277 aaPredicted RBP17.06■□□□□ 0.32
VSX1-202ENST00000376709 WFDC1Q9HC57 220 aa17.06■□□□□ 0.32
VSX1-202ENST00000376709 TREM1Q9NP99 234 aa17.06■□□□□ 0.32
VSX1-202ENST00000376709 FAM212BQ9NTI7 297 aaPredicted RBP17.06■□□□□ 0.32
VSX1-202ENST00000376709 KCNS2Q9ULS6 477 aa17.06■□□□□ 0.32
VSX1-202ENST00000376709 WIPI2Q9Y4P8 454 aa17.06■□□□□ 0.32
VSX1-202ENST00000376709 KIAA2026Q5HYC2 2103 aa17.06■□□□□ 0.32
VSX1-202ENST00000376709 CLEC18AA5D8T8 446 aa17.06■□□□□ 0.32
VSX1-202ENST00000376709 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.06■□□□□ 0.32
VSX1-202ENST00000376709 PSPNO60542 156 aa17.06■□□□□ 0.32
VSX1-202ENST00000376709 VAMP2P63027 116 aa17.06■□□□□ 0.32
VSX1-202ENST00000376709 EWSR1Q01844 656 aaKnown RBP eCLIP17.06■□□□□ 0.32
VSX1-202ENST00000376709 Q6ZR03 302 aa17.06■□□□□ 0.32
VSX1-202ENST00000376709 CLEC18CQ8NCF0 446 aa17.06■□□□□ 0.32
VSX1-202ENST00000376709 TSNAXQ99598 290 aaKnown RBP17.06■□□□□ 0.32
VSX1-202ENST00000376709 CEP295Q9C0D2 2601 aa17.06■□□□□ 0.32
VSX1-202ENST00000376709 PIGBOS1A0A0B4J2F0 54 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 FAM74A7A6NL05 159 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 PSG2P11465 335 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 FAM74A3Q4VXF1 159 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 Q6ZRG5 221 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 ABHD14BQ96IU4 210 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 ARV1Q9H2C2 271 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 KCNIP1Q9NZI2 227 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 PPP1R3CQ9UQK1 317 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 TMEM30CPA0ZSE6 113 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 FAM24AA6NFZ4 105 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 DNASE2O00115 360 aaPredicted RBP17.05■□□□□ 0.32
VSX1-202ENST00000376709 NXPH3O95157 252 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 CEACAM6P40199 344 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 HOXA4Q00056 320 aaPredicted RBP17.05■□□□□ 0.32
VSX1-202ENST00000376709 HMGN3Q15651 99 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 GUCA2BQ16661 112 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 MBNL2Q5VZF2 373 aaKnown RBP17.05■□□□□ 0.32
VSX1-202ENST00000376709 WDR82Q6UXN9 313 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 RNASE11Q8TAA1 199 aaKnown RBP17.05■□□□□ 0.32
VSX1-202ENST00000376709 PARP11Q9NR21 331 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 SLC25A15Q9Y619 301 aa17.05■□□□□ 0.32
VSX1-202ENST00000376709 WRBO00258 174 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 OR8U9P0C7N5 309 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 SEC11BP0C7V7 166 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 EPHA1P21709 976 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 ASCL1P50553 236 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 F2RL1P55085 397 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 SMUG1Q53HV7 270 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 ACP7Q6ZNF0 438 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms