RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ELP2Q6IA86 826 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 TMEM65Q6PI78 240 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 FAM131AQ6UXB0 335 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 MKXQ8IYA7 352 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 FBXL14Q8N1E6 418 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 PNLDC1Q8NA58 520 aaKnown RBP2.96□□□□□ -1.94
MCF2-202ENST00000370573 S100ZQ8WXG8 99 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 MSI2Q96DH6 328 aaKnown RBP2.96□□□□□ -1.94
MCF2-202ENST00000370573 SEH1LQ96EE3 360 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 S100A16Q96FQ6 103 aaKnown RBP2.96□□□□□ -1.94
MCF2-202ENST00000370573 BSCL2Q96G97 398 aaPredicted RBP2.96□□□□□ -1.94
MCF2-202ENST00000370573 OR2V2Q96R30 315 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 NRIP2Q9BQI9 281 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 TM2D1Q9BX74 207 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 SELENOIQ9C0D9 397 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 HMG20AQ9NP66 347 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 C1orf123Q9NWV4 160 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 IL36GQ9NZH8 169 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 MRPS7Q9Y2R9 242 aaKnown RBP2.96□□□□□ -1.94
MCF2-202ENST00000370573 LINC00854A0A1B0GVQ3 168 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 MEIOCA2RUB1 952 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 TRAPPC2LH3BP13 241 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.96□□□□□ -1.94
MCF2-202ENST00000370573 HS3ST1O14792 307 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 GEMIN2O14893 280 aaKnown RBP2.96□□□□□ -1.94
MCF2-202ENST00000370573 MPPED1O15442 326 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 AKR7A2O43488 359 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 NOS1APO75052 506 aaPredicted RBP2.96□□□□□ -1.94
MCF2-202ENST00000370573 RGS11O94810 467 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 TGFAP01135 160 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 TFF1P04155 84 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 CD55P08174 381 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 SOD3P08294 240 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 ACAA1P09110 424 aaPredicted RBP2.96□□□□□ -1.94
MCF2-202ENST00000370573 PGA5P0DJD9 388 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 CD40LGP29965 261 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 MNDAP41218 407 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 PITPNBP48739 271 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 AP2S1P53680 142 aaPredicted RBP2.96□□□□□ -1.94
MCF2-202ENST00000370573 TAS2R20P59543 309 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 GMFBP60983 142 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 CCL8P80075 99 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 TNFAIP6P98066 277 aaPredicted RBP2.96□□□□□ -1.94
MCF2-202ENST00000370573 IL18Q14116 193 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 TAF9Q16594 264 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 CDNFQ49AH0 187 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 PYDC2Q56P42 97 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 OLFML2AQ68BL7 652 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 C11orf71Q6IPW1 123 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 SLC25A24Q6NUK1 477 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 WDR82Q6UXN9 313 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 DNM1P46Q6ZS02 220 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 OSR2Q8N2R0 312 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 CENPSQ8N2Z9 138 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 MUC15Q8N387 334 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 OR51T1Q8NGJ9 327 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 OR10R2Q8NGX6 335 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 OR10Z1Q8NGY1 313 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 ENKURQ8TC29 256 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 ERGIC1Q969X5 290 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 CPNE2Q96FN4 548 aaPredicted RBP2.96□□□□□ -1.94
MCF2-202ENST00000370573 S100A13Q99584 98 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 TMEM59Q9BXS4 323 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 CST11Q9H112 138 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 WDR13Q9H1Z4 485 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 AUNIPQ9H7T9 357 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 HES4Q9HCC6 221 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 TREM2Q9NZC2 230 aa2.96□□□□□ -1.94
MCF2-202ENST00000370573 FBN2P35556 2912 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 RAI1Q7Z5J4 1906 aaPredicted RBP2.95□□□□□ -1.94
MCF2-202ENST00000370573 DYSFO75923 2080 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 FAM90A10PA6NDY2 464 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 M0R233 179 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 SSX5O60225 188 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 ZNF780AO75290 641 aaPredicted RBP2.95□□□□□ -1.94
MCF2-202ENST00000370573 DIRAS3O95661 229 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 LHBP01229 141 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 CSF3P09919 207 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 GTF2F2P13984 249 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 GNB3P16520 340 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 GABRR1P24046 479 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 PTBP1P26599 531 aaKnown RBP eCLIP2.95□□□□□ -1.94
MCF2-202ENST00000370573 BLVRBP30043 206 aaPredicted RBP2.95□□□□□ -1.94
MCF2-202ENST00000370573 CFHR2P36980 270 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 NR4A2P43354 598 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 SRP9P49458 86 aaKnown RBP2.95□□□□□ -1.94
MCF2-202ENST00000370573 RBM11P57052 281 aaKnown RBP2.95□□□□□ -1.94
MCF2-202ENST00000370573 FGF12P61328 243 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 GPR176Q14439 515 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 KCNJ8Q15842 424 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 ZNF260Q3ZCT1 412 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 TMEM69Q5SWH9 247 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 FAM201AQ5SY85 155 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 C6orf183Q5T699 404 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 PYHIN1Q6K0P9 492 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 Q6P435 159 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 ZNF575Q86XF7 245 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 FAM58AQ8N1B3 248 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 GCSAMQ8N6F7 178 aa2.95□□□□□ -1.94
MCF2-202ENST00000370573 GDPD1Q8N9F7 314 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms