RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 COL10A1Q03692 680 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 ERASQ7Z444 233 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 HOGA1Q86XE5 327 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 ZG16BQ96DA0 208 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 PACRGQ96M98 296 aaPredicted RBP5.66□□□□□ -1.5
UPF2-201ENST00000356352 PIMREGQ9BSJ6 248 aa5.66□□□□□ -1.5
UPF2-201ENST00000356352 TRAV30A0A087WSZ9 112 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 IFITM10A6NMD0 228 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 MGST3O14880 152 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 SOCS1O15524 211 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 MAS1LP35410 378 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 TCTAP57738 103 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 GGTLC2Q14390 218 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 SEZ6L2Q6UXD5 910 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 SSMEM1Q8WWF3 244 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 TTTY12Q9BZ98 90 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 MOB4Q9Y3A3 225 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 AUP1Q9Y679 476 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 LRP5O75197 1615 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 FAM90A10PA6NDY2 464 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 FAM90A18PA6NE21 464 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 FAM90A16PA6NEW6 464 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 FAM90A20PA6NIJ5 464 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 FAM90A8PA6NJQ4 464 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 FAM90A7PA6NKC0 464 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 FAM90A22PA8MWA6 464 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 FAM90A12PA8MX19 464 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 FAM90A5PA8MXJ8 464 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 FAM90A23PA8MXZ1 464 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 CDC42EP2O14613 210 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 GCGP01275 180 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 MT-ND6P03923 174 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 FAM90A15PP0C7V4 464 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 FAM90A13PP0C7W8 464 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 FAM90A14PP0C7W9 464 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 FAM90A24PP0C7X0 464 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 HOXB1P14653 301 aaPredicted RBP5.65□□□□□ -1.5
UPF2-201ENST00000356352 RBM11P57052 281 aaKnown RBP5.65□□□□□ -1.5
UPF2-201ENST00000356352 SERF2P84101 59 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 PSG6Q00889 435 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 WDR25Q64LD2 544 aaPredicted RBP5.65□□□□□ -1.5
UPF2-201ENST00000356352 RAX2Q96IS3 184 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 ABHD14BQ96IU4 210 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 ZDHHC8Q9ULC8 765 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 MYO10Q9HD67 2058 aa5.65□□□□□ -1.5
UPF2-201ENST00000356352 A0A1B0GTH9 108 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 NPIPB8E9PQR5 432 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 PAGE4O60829 102 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 CELA2BP08218 269 aaPredicted RBP5.65□□□□□ -1.51
UPF2-201ENST00000356352 SMIM6P0DI80 62 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 HTN1P15515 57 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 PRDX2P32119 198 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 MEOX2P50222 304 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 TCL1AP56279 114 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 FAM3BP58499 235 aaPredicted RBP5.65□□□□□ -1.51
UPF2-201ENST00000356352 RPL31P62899 125 aaKnown RBP5.65□□□□□ -1.51
UPF2-201ENST00000356352 RPL24P83731 157 aaKnown RBP5.65□□□□□ -1.51
UPF2-201ENST00000356352 ABLIM2Q6H8Q1 611 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 MDP1Q86V88 176 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 H1FOOQ8IZA3 346 aaPredicted RBP5.65□□□□□ -1.51
UPF2-201ENST00000356352 OR4A5Q8NH83 315 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 ZNF519Q8TB69 540 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 CDX2Q99626 313 aaPredicted RBP5.65□□□□□ -1.51
UPF2-201ENST00000356352 FLRT3Q9NZU0 649 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 MIOXQ9UGB7 285 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 PITPNC1Q9UKF7 332 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 A0A0U1RQV5 110 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 S1PR2O95136 353 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 RPLP1P05386 114 aaKnown RBP5.65□□□□□ -1.51
UPF2-201ENST00000356352 CCL3P10147 92 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 MMP16P51512 607 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 MVDP53602 400 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 TWIST1Q15672 202 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 HIKESHIQ53FT3 197 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 FAM53AQ6NSI3 398 aaPredicted RBP5.65□□□□□ -1.51
UPF2-201ENST00000356352 BVESQ8NE79 360 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 OR8A1Q8NGG7 326 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 MRGPRFQ96AM1 343 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 PGLYRP3Q96LB9 341 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 DDA1Q9BW61 102 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 NPVFQ9HCQ7 196 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 FAM60AQ9NP50 221 aa5.65□□□□□ -1.51
UPF2-201ENST00000356352 AHRRA9YTQ3 701 aa5.64□□□□□ -1.51
UPF2-201ENST00000356352 H3BVH4 76 aa5.64□□□□□ -1.51
UPF2-201ENST00000356352 DLL1O00548 723 aa5.64□□□□□ -1.51
UPF2-201ENST00000356352 ADAP1O75689 374 aa5.64□□□□□ -1.51
UPF2-201ENST00000356352 IL9P15248 144 aa5.64□□□□□ -1.51
UPF2-201ENST00000356352 RPL27AP46776 148 aaKnown RBP5.64□□□□□ -1.51
UPF2-201ENST00000356352 OR2D3Q8NGH3 330 aa5.64□□□□□ -1.51
UPF2-201ENST00000356352 A8MWL6 223 aa5.64□□□□□ -1.51
UPF2-201ENST00000356352 SNURFLB1AK76 121 aa5.64□□□□□ -1.51
UPF2-201ENST00000356352 PSG2P11465 335 aa5.64□□□□□ -1.51
UPF2-201ENST00000356352 CEBPDP49716 269 aaPredicted RBP5.64□□□□□ -1.51
UPF2-201ENST00000356352 TNFSF10P50591 281 aa5.64□□□□□ -1.51
UPF2-201ENST00000356352 CEACAM21Q3KPI0 293 aa5.64□□□□□ -1.51
UPF2-201ENST00000356352 MRPL54Q6P161 138 aaKnown RBP5.64□□□□□ -1.51
UPF2-201ENST00000356352 PRNTQ86SH4 94 aa5.64□□□□□ -1.51
UPF2-201ENST00000356352 WFDC3Q8IUB2 231 aa5.64□□□□□ -1.51
UPF2-201ENST00000356352 MRPL24Q96A35 216 aaKnown RBP5.64□□□□□ -1.51
UPF2-201ENST00000356352 C16orf92Q96LL3 132 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms