RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 OR2AE1Q8NHA4 323 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 C11orf40Q8WZ69 217 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 ADAT3Q96EY9 351 aaPredicted RBP8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 PHF7Q9BWX1 381 aaPredicted RBP8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 MRPL18Q9H0U6 180 aaKnown RBP8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 NKX2-4Q9H2Z4 354 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 GNB4Q9HAV0 340 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 CRIM1Q9NZV1 1036 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 HCFC2Q9Y5Z7 792 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 DUXBA0A1W2PPF3 345 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 GAGE10A6NGK3 116 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 C11orf98E9PRG8 122 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 PLPP3O14495 311 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 PRKNO60260 465 aaPredicted RBP8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 ZNF253O75346 499 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 SNRNP200O75643 2136 aaKnown RBP8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 CRYAAP02489 173 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 C8AP07357 584 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 FSTP19883 344 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 KITLGP21583 273 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 OPRM1P35372 400 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 MTCP1P56278 107 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 RPL24P83731 157 aaKnown RBP8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 C1orf100Q5SVJ3 147 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 BRICD5Q6PL45 260 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 KLHDC1Q8N7A1 406 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 ZNF114Q8NC26 417 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 OR1K1Q8NGR3 316 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 MRPL30Q8TCC3 161 aaKnown RBP8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 CXorf40AQ8TE69 158 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 CACNG8Q8WXS5 425 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 OR5P3Q8WZ94 311 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 LRFN3Q9BTN0 628 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 TM2D1Q9BX74 207 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 GP6Q9HCN6 339 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 PPP1R3CQ9UQK1 317 aa8.32□□□□□ -1.08
PTCHD4-201ENST00000339488 HIDE1A8MVS5 230 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 NPIPA5E9PKD4 350 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 NPIPA3F8WFD2 350 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 PHF1O43189 567 aaPredicted RBP8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 EOMESO95936 686 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 ZNF10P21506 573 aaPredicted RBP8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 DUSP1P28562 367 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 CDC42EP1Q00587 391 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 MEF2CQ06413 473 aaPredicted RBP8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 TMEM187Q14656 261 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 CD226Q15762 336 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 BVES-AS1Q5T3Y7 98 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 SLC48A1Q6P1K1 146 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 TMEFF1Q8IYR6 380 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 CMTM8Q8IZV2 173 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 OTOSQ8NHW6 89 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 CT55Q8WUE5 264 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 ZNF681Q96N22 645 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 LRRC61Q9BV99 259 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 C19orf24Q9BVV8 132 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 MRPL13Q9BYD1 178 aaKnown RBP8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 TMEM74BQ9NUR3 256 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 NPIPA1Q9UND3 350 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 FAM166BA8MTA8 275 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 K7ESM1 405 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 LATO43561 262 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 RAMP3O60896 148 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 ZNF16P17020 682 aaPredicted RBP8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 CA7P43166 264 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 UQCRFS1P47985 274 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 RRADP55042 308 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 PRTGQ2VWP7 1150 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 TXNDC8Q6A555 127 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 OR4P4Q8NGL7 312 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 TSPAN32Q96QS1 320 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 JMJD8Q96S16 334 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 HHLA2Q9UM44 414 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 POLR1DQ9Y2S0 133 aa8.31□□□□□ -1.08
PTCHD4-201ENST00000339488 ZNF816-ZNF321PA0A0X1KG74 233 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 ZNF732B4DXR9 585 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 K7EQM0 130 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 HIST1H1TP22492 207 aaPredicted RBP8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 SRP14P37108 136 aaKnown RBP8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 IER3P46695 156 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 MEF2BQ02080 365 aaPredicted RBP8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 TGFBR3Q03167 851 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 GABRA6Q16445 453 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 ABCA11PQ4W5N1 156 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 ALG10Q5BKT4 473 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 PLCXD3Q63HM9 321 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 FDX2Q6P4F2 183 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 AMZ2Q86W34 360 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 FAM58AQ8N1B3 248 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 OR4N2Q8NGD1 307 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 ZNF689Q96CS4 500 aaPredicted RBP8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 KLHDC7BQ96G42 594 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 GPER1Q99527 375 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 SLC25A22Q9H936 323 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 CES1P1Q9UKY3 287 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 OR51B4Q9Y5P0 310 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 TRPM6Q9BX84 2022 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 ATG2AQ2TAZ0 1938 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 A0A087X0K7 114 aa8.3□□□□□ -1.08
PTCHD4-201ENST00000339488 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms