RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 MOB3AQ96BX8 217 aa12.24□□□□□ -0.45
CDK5RAP3-201ENST00000338399 GALMQ96C23 342 aa12.24□□□□□ -0.45
CDK5RAP3-201ENST00000338399 KAAG1Q9UBP8 84 aa12.24□□□□□ -0.45
CDK5RAP3-201ENST00000338399 FAM172BPA6NC97 362 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 HSPA12AO43301 675 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 NDUFB3O43676 98 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 FSTL3O95633 263 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 DIRAS3O95661 229 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 OR4E1P0C645 316 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 ZNF728P0DKX0 622 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 GZMHP20718 246 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 IL2RGP31785 369 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 ECI1P42126 302 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 EFNA4P52798 201 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 SURF2Q15527 256 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 TRAT1Q6PIZ9 186 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 H1FOOQ8IZA3 346 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 IGFBPL1Q8WX77 278 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 RAB1CQ92928 201 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 C14orf79Q96F83 325 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 TIMD4Q96H15 378 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 CCL19Q99731 98 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 RTBDNQ9BSG5 229 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 NCOR1P1Q9H4R4 102 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 CHODLQ9H9P2 273 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 GPN1Q9HCN4 374 aaPredicted RBP12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 OR6C3Q9NZP0 311 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 ITGB1BP2Q9UKP3 347 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 LRRK2Q5S007 2527 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 HMX3A6NHT5 357 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 C15orf65H3BRN8 121 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 DVL1O14640 695 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 TUSC2O75896 110 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 CR1LQ2VPA4 569 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 LRRC10Q5BKY1 277 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 CHAC2Q8WUX2 184 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 NEURL2Q9BR09 285 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 ZNF69Q9UC07 566 aa12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 C14orf166Q9Y224 244 aaKnown RBP12.23□□□□□ -0.45
CDK5RAP3-201ENST00000338399 UTP20O75691 2785 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-201ENST00000338399 DOCK11Q5JSL3 2073 aa12.22□□□□□ -0.45
CDK5RAP3-201ENST00000338399 NPIPB11E5RHQ5 1161 aa12.22□□□□□ -0.45
CDK5RAP3-201ENST00000338399 SPINT2O43291 252 aa12.22□□□□□ -0.45
CDK5RAP3-201ENST00000338399 HEXAP06865 529 aa12.22□□□□□ -0.45
CDK5RAP3-201ENST00000338399 CEACAM6P40199 344 aa12.22□□□□□ -0.45
CDK5RAP3-201ENST00000338399 RRAS2P62070 204 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-201ENST00000338399 ZNF626Q68DY1 528 aa12.22□□□□□ -0.45
CDK5RAP3-201ENST00000338399 ZNF295-AS1Q8N0V1 137 aa12.22□□□□□ -0.45
CDK5RAP3-201ENST00000338399 MUC20Q8N307 709 aaPredicted RBP12.22□□□□□ -0.45
CDK5RAP3-201ENST00000338399 OR52L2PQ8NGH6 319 aa12.22□□□□□ -0.45
CDK5RAP3-201ENST00000338399 ZFAND1Q8TCF1 268 aa12.22□□□□□ -0.45
CDK5RAP3-201ENST00000338399 TMEM230Q96A57 120 aa12.22□□□□□ -0.45
CDK5RAP3-201ENST00000338399 MED28Q9H204 178 aa12.22□□□□□ -0.45
CDK5RAP3-201ENST00000338399 YLPM1P49750 1951 aaKnown RBP12.22□□□□□ -0.45
CDK5RAP3-201ENST00000338399 TRGV10A0A0A0MS01 117 aa12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 IGKV1D-13A0A0B4J2D9 117 aa12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 SSNA1O43805 119 aa12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 CREBL2O60519 120 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 CTSDP07339 412 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 IGKV1-13P0DP09 117 aa12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 ZBTB25P24278 435 aa12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 UCP3P55916 312 aa12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 TMEM33P57088 247 aa12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 TAS2R31P59538 309 aa12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 PPP1R1AQ13522 171 aa12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 LTC4SQ16873 150 aa12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 FAM53AQ6NSI3 398 aaPredicted RBP12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 TCF23Q7RTU1 214 aa12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 SECTM1Q8WVN6 248 aa12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 H1FXQ92522 213 aaKnown RBP12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 RDH8Q9NYR8 311 aa12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 OPN4Q9UHM6 478 aa12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 OR2W1Q9Y3N9 320 aa12.21□□□□□ -0.45
CDK5RAP3-201ENST00000338399 IGHV3-43A0A0B4J1X8 118 aa12.21□□□□□ -0.46
CDK5RAP3-201ENST00000338399 SNRPGP15A8MWD9 76 aa12.21□□□□□ -0.46
CDK5RAP3-201ENST00000338399 IGHV3-43DP0DP04 118 aa12.21□□□□□ -0.46
CDK5RAP3-201ENST00000338399 RPS2P15880 293 aaKnown RBP12.21□□□□□ -0.46
CDK5RAP3-201ENST00000338399 UBE2MP61081 183 aaKnown RBP12.21□□□□□ -0.46
CDK5RAP3-201ENST00000338399 RPL31P62899 125 aaKnown RBP12.21□□□□□ -0.46
CDK5RAP3-201ENST00000338399 CD300CQ08708 224 aa12.21□□□□□ -0.46
CDK5RAP3-201ENST00000338399 DHRS2Q13268 280 aa12.21□□□□□ -0.46
CDK5RAP3-201ENST00000338399 GNMTQ14749 295 aa12.21□□□□□ -0.46
CDK5RAP3-201ENST00000338399 PARP12Q9H0J9 701 aaKnown RBP12.21□□□□□ -0.46
CDK5RAP3-201ENST00000338399 OR2S2Q9NQN1 319 aa12.21□□□□□ -0.46
CDK5RAP3-201ENST00000338399 C19orf12Q9NSK7 152 aa12.21□□□□□ -0.46
CDK5RAP3-201ENST00000338399 CALYQ9NYX4 217 aa12.21□□□□□ -0.46
CDK5RAP3-201ENST00000338399 hADV38S2A0JD32 116 aa12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 HLA-AP01891 365 aaKnown RBP12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 CGB3P0DN86 165 aa12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 CGB7P0DN87 165 aa12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 OMGP23515 440 aa12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 VAMP1P23763 118 aa12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 DHODHQ02127 395 aa12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 FCN2Q15485 313 aa12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 C17orf58Q2M2W7 97 aa12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 ABCA11PQ4W5N1 156 aa12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 TMEM128Q5BJH2 165 aa12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 FAHD2BQ6P2I3 314 aaPredicted RBP12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 AKAP14Q86UN6 197 aa12.2□□□□□ -0.46
CDK5RAP3-201ENST00000338399 LDLRAD3Q86YD5 345 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms