RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 ESCO2Q56NI9 601 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 RBM48Q5RL73 367 aaKnown RBP6.93□□□□□ -1.3
CHD6-201ENST00000309279 LIPKQ5VXJ0 399 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 OR2T2Q6IF00 324 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 LPCAT3Q6P1A2 487 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 SPNS3Q6ZMD2 512 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 Q6ZSR3 168 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 FAM220AQ7Z4H9 259 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 ANGPTL5Q86XS5 388 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 ZCCHC24Q8N2G6 241 aaKnown RBP6.93□□□□□ -1.3
CHD6-201ENST00000309279 PRSS35Q8N3Z0 413 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 STPG2Q8N412 459 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 FGFRL1Q8N441 504 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 OR8G5Q8NG78 346 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 OR2G2Q8NGZ5 317 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 OR52E5Q8NH55 327 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 CREB3L1Q96BA8 519 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 TRMT61AQ96FX7 289 aaKnown RBP6.93□□□□□ -1.3
CHD6-201ENST00000309279 LYZL4Q96KX0 146 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 NOL4LQ96MY1 436 aaPredicted RBP6.93□□□□□ -1.3
CHD6-201ENST00000309279 FOXC2Q99958 501 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 GGACTQ9BVM4 153 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 CDCA4Q9BXL8 241 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 CXXC4Q9H2H0 198 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 PPA2Q9H2U2 334 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 SLA2Q9H6Q3 261 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 SLC2A9Q9NRM0 540 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 PAK1IP1Q9NWT1 392 aaPredicted RBP6.93□□□□□ -1.3
CHD6-201ENST00000309279 FRRS1LQ9P0K9 344 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 CLN8Q9UBY8 286 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 KIF25Q9UIL4 384 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 SLC45A2Q9UMX9 530 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 CREBBPQ92793 2442 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 ITPR3Q14573 2671 aa6.93□□□□□ -1.3
CHD6-201ENST00000309279 TOX4O94842 621 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 GAPDHP04406 335 aaKnown RBP6.92□□□□□ -1.3
CHD6-201ENST00000309279 GZMHP20718 246 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 CCL1P22362 96 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 PMELP40967 661 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 PTH2RP49190 550 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 VEGFCP49767 419 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 AKR1D1P51857 326 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 NANOS3P60323 173 aaKnown RBP6.92□□□□□ -1.3
CHD6-201ENST00000309279 TPBGQ13641 420 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 MPPED2Q15777 294 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 ACSM3Q53FZ2 586 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 OR2B11Q5JQS5 317 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 WDR38Q5JTN6 314 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 Q6ZR03 302 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 H2BFWTQ7Z2G1 175 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 TBC1D26Q86UD7 250 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 ZNF738Q8NE65 137 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 NEU4Q8WWR8 484 aaPredicted RBP6.92□□□□□ -1.3
CHD6-201ENST00000309279 OR5M11Q96RB7 305 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 NDUFAF3Q9BU61 184 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 MND1Q9BWT6 205 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 MSL2Q9HCI7 577 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 Q9N2K0 584 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 DYNLRB1Q9NP97 96 aa6.92□□□□□ -1.3
CHD6-201ENST00000309279 GGT3PA6NGU5 568 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 DHRS7CA6NNS2 312 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 NPIPB11E5RHQ5 1161 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 NPIPB6E9PJ23 425 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 M0QZ24 198 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 CDIPTO14735 213 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 PPP1R2P9O14990 202 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 NDUFS7O75251 213 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 IGHV1-46P01743 117 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 IGHV4-39P01824 125 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 ISG15P05161 165 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 CD55P08174 381 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 HTR1AP08908 422 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 GABRR1P24046 479 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 RPL5P46777 297 aaKnown RBP6.91□□□□□ -1.3
CHD6-201ENST00000309279 EFNA4P52798 201 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 PSG5Q15238 335 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 LINC01620Q4KN68 170 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 BCL2L15Q5TBC7 163 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 OR8G2PQ6IF36 304 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 DNM1P46Q6ZS02 220 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 PRSS48Q7RTY5 328 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 MTURNQ8N3F0 131 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 OR1L6Q8NGR2 347 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 OR10K1Q8NGX5 313 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 OR13G1Q8NGZ3 307 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 OR51E1Q8TCB6 317 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 RPS4Y2Q8TD47 263 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 ZNF486Q96H40 463 aaPredicted RBP6.91□□□□□ -1.3
CHD6-201ENST00000309279 C11orf54Q9H0W9 315 aaPredicted RBP6.91□□□□□ -1.3
CHD6-201ENST00000309279 MMP28Q9H239 520 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 GPR84Q9NQS5 396 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 TMEM100Q9NV29 134 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 ELF5Q9UKW6 265 aaPredicted RBP6.91□□□□□ -1.3
CHD6-201ENST00000309279 SLC7A11Q9UPY5 501 aa6.91□□□□□ -1.3
CHD6-201ENST00000309279 OR4C45A6NMZ5 311 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 MLNRO43193 412 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 DHRS3O75911 302 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 SCGNO76038 276 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 CRYBB2P43320 205 aa6.9□□□□□ -1.3
CHD6-201ENST00000309279 MAP2K3P46734 347 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms