RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 ELF5Q9UKW6 265 aaPredicted RBP12.46□□□□□ -0.41
UBXN1-202ENST00000301935 UBE2J1Q9Y385 318 aaPredicted RBP12.46□□□□□ -0.41
UBXN1-202ENST00000301935 LINC00312Q9Y6C7 94 aa12.46□□□□□ -0.41
UBXN1-202ENST00000301935 DOCK11Q5JSL3 2073 aa12.46□□□□□ -0.42
UBXN1-202ENST00000301935 LOC105371242A0A075B767 164 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 TRDCB7Z8K6 153 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 FOXH1O75593 365 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 TFF1P04155 84 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 PTHLHP12272 177 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 IL7P13232 177 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 FAUP35544 74 aaKnown RBP12.45□□□□□ -0.42
UBXN1-202ENST00000301935 GDNFP39905 211 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 GLIPR1P48060 266 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 TAS2R46P59540 309 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 TAS2R19P59542 299 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 GUCA2AQ02747 115 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 DYRK1AQ13627 763 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 EDDM3AQ14507 147 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 TMEM30BQ3MIR4 351 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 C16orf87Q6PH81 154 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 TOMM5Q8N4H5 51 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 TMEM229BQ8NBD8 167 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 BEST4Q8NFU0 473 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 C8orf46Q8TAG6 207 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 JMJD8Q96S16 334 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 C7orf50Q9BRJ6 194 aaKnown RBP12.45□□□□□ -0.42
UBXN1-202ENST00000301935 DCTN5Q9BTE1 182 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 TAS2R3Q9NYW6 316 aa12.45□□□□□ -0.42
UBXN1-202ENST00000301935 A0A1B0GW55 424 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 ANKRD20A5PA0PJZ0 165 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 CENPXA8MT69 81 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 A8MXK9 166 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 J3QRK9 145 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 SPINT2O43291 252 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 AVPP01185 164 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 LIPFP07098 398 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 DUX4L2P0CJ85 424 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 DUX4L3P0CJ86 424 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 DUX4L4P0CJ87 422 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 DUX4L5P0CJ88 424 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 DUX4L6P0CJ89 424 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 DUX4L7P0CJ90 424 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 SELLP14151 372 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 DCTN2Q13561 401 aaKnown RBP12.44□□□□□ -0.42
UBXN1-202ENST00000301935 BAK1Q16611 211 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 DUX4L9Q6RFH8 374 aaPredicted RBP12.44□□□□□ -0.42
UBXN1-202ENST00000301935 RTN4RL2Q86UN3 420 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 OR4A4PQ8NGN8 299 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 OR4K15Q8NH41 348 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 SETD6Q8TBK2 473 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 H1FXQ92522 213 aaKnown RBP12.44□□□□□ -0.42
UBXN1-202ENST00000301935 DYRK2Q92630 601 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 TRIM63Q969Q1 353 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 HDHD3Q9BSH5 251 aaPredicted RBP12.44□□□□□ -0.42
UBXN1-202ENST00000301935 GAL3ST2Q9H3Q3 398 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 DUX4Q9UBX2 424 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 POLR3KQ9Y2Y1 108 aaPredicted RBP12.44□□□□□ -0.42
UBXN1-202ENST00000301935 MEGF8Q7Z7M0 2845 aa12.44□□□□□ -0.42
UBXN1-202ENST00000301935 hCG_1809904A0A1W2PP81 198 aa12.43□□□□□ -0.42
UBXN1-202ENST00000301935 A0A1W2PPE2 198 aa12.43□□□□□ -0.42
UBXN1-202ENST00000301935 A0A1W2PR64 198 aa12.43□□□□□ -0.42
UBXN1-202ENST00000301935 A0A1W2PRV1 198 aa12.43□□□□□ -0.42
UBXN1-202ENST00000301935 ZNF729A6NN14 1252 aaPredicted RBP12.43□□□□□ -0.42
UBXN1-202ENST00000301935 ZNF736B4DX44 427 aaPredicted RBP12.43□□□□□ -0.42
UBXN1-202ENST00000301935 OR3A3P47888 321 aa12.43□□□□□ -0.42
UBXN1-202ENST00000301935 DEFA1P59665 94 aa12.43□□□□□ -0.42
UBXN1-202ENST00000301935 DEFA3P59666 94 aa12.43□□□□□ -0.42
UBXN1-202ENST00000301935 ARPC4P59998 168 aa12.43□□□□□ -0.42
UBXN1-202ENST00000301935 MEF2DQ14814 521 aa12.43□□□□□ -0.42
UBXN1-202ENST00000301935 ZNF57Q68EA5 555 aaPredicted RBP12.43□□□□□ -0.42
UBXN1-202ENST00000301935 BTN2A1Q7KYR7 527 aa12.43□□□□□ -0.42
UBXN1-202ENST00000301935 OR10A7Q8NGE5 316 aa12.43□□□□□ -0.42
UBXN1-202ENST00000301935 OR5AP2Q8NGF4 316 aa12.43□□□□□ -0.42
UBXN1-202ENST00000301935 TMPRSS13Q9BYE2 586 aa12.43□□□□□ -0.42
UBXN1-202ENST00000301935 LINC00574Q9H8X3 128 aa12.43□□□□□ -0.42
UBXN1-202ENST00000301935 ABCB10Q9NRK6 738 aa12.43□□□□□ -0.42
UBXN1-202ENST00000301935 ANXA10Q9UJ72 324 aa12.43□□□□□ -0.42
UBXN1-202ENST00000301935 NAP1L6A6NFF2 107 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 FABP7O15540 132 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 RBP4P02753 201 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 CD74P04233 296 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 AKAIN1P0CW23 69 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 GLP1RP43220 463 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 HLA-DRB3P79483 266 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 HMGN3Q15651 99 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 RNASE12Q5GAN4 147 aaKnown RBP12.42□□□□□ -0.42
UBXN1-202ENST00000301935 STEAP1BQ6NZ63 245 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 LYSMD2Q8IV50 215 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 GVQW1Q8N7I0 195 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 LY6G5BQ8NDX9 201 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 OR5H2Q8NGV7 314 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 CCDC107Q8WV48 283 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 GALMQ96C23 342 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 SUCNR1Q9BXA5 334 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 TAF9BQ9HBM6 251 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 NECAP2Q9NVZ3 263 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 ING3Q9NXR8 418 aa12.42□□□□□ -0.42
UBXN1-202ENST00000301935 ZNF230Q9UIE0 474 aaPredicted RBP12.42□□□□□ -0.42
UBXN1-202ENST00000301935 RPUSD1Q9UJJ7 312 aaKnown RBP12.42□□□□□ -0.42
UBXN1-202ENST00000301935 PPIAL4CA0A0B4J2A2 164 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms