RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 ERGIC1Q969X5 290 aa20.49■□□□□ 0.87
SSBP4-201ENST00000270061 C1QBP02746 253 aa20.49■□□□□ 0.87
SSBP4-201ENST00000270061 GMFBP60983 142 aa20.49■□□□□ 0.87
SSBP4-201ENST00000270061 LYG2Q86SG7 212 aa20.49■□□□□ 0.87
SSBP4-201ENST00000270061 ITLN1Q8WWA0 313 aa20.49■□□□□ 0.87
SSBP4-201ENST00000270061 TRDCB7Z8K6 153 aa20.48■□□□□ 0.87
SSBP4-201ENST00000270061 LHBP01229 141 aa20.48■□□□□ 0.87
SSBP4-201ENST00000270061 GPR6P46095 362 aaPredicted RBP20.48■□□□□ 0.87
SSBP4-201ENST00000270061 TMEM33P57088 247 aa20.48■□□□□ 0.87
SSBP4-201ENST00000270061 TMEM128Q5BJH2 165 aa20.48■□□□□ 0.87
SSBP4-201ENST00000270061 ZNF497Q6ZNH5 498 aa20.48■□□□□ 0.87
SSBP4-201ENST00000270061 NOXA1Q86UR1 476 aa20.48■□□□□ 0.87
SSBP4-201ENST00000270061 ADAD2Q8NCV1 583 aaKnown RBP20.48■□□□□ 0.87
SSBP4-201ENST00000270061 MSI2Q96DH6 328 aaKnown RBP20.48■□□□□ 0.87
SSBP4-201ENST00000270061 RTBDNQ9BSG5 229 aaPredicted RBP20.48■□□□□ 0.87
SSBP4-201ENST00000270061 ZNF436Q9C0F3 470 aaPredicted RBP20.48■□□□□ 0.87
SSBP4-201ENST00000270061 SAP30LQ9HAJ7 183 aa20.48■□□□□ 0.87
SSBP4-201ENST00000270061 CD55P08174 381 aa20.47■□□□□ 0.87
SSBP4-201ENST00000270061 CTXN2P0C2S0 81 aa20.47■□□□□ 0.87
SSBP4-201ENST00000270061 TNFAIP6P98066 277 aaPredicted RBP20.47■□□□□ 0.87
SSBP4-201ENST00000270061 PPP1R1AQ13522 171 aa20.47■□□□□ 0.87
SSBP4-201ENST00000270061 SPRNQ5BIV9 151 aa20.47■□□□□ 0.87
SSBP4-201ENST00000270061 FAM209AQ5JX71 171 aa20.47■□□□□ 0.87
SSBP4-201ENST00000270061 C12orf45Q8N5I9 185 aaPredicted RBP20.47■□□□□ 0.87
SSBP4-201ENST00000270061 OR2AK2Q8NG84 335 aa20.47■□□□□ 0.87
SSBP4-201ENST00000270061 MGAT4CQ9UBM8 478 aa20.47■□□□□ 0.87
SSBP4-201ENST00000270061 MGAT4AQ9UM21 535 aa20.47■□□□□ 0.87
SSBP4-201ENST00000270061 CUBNO60494 3623 aa20.47■□□□□ 0.87
SSBP4-201ENST00000270061 C9orf170A2RU37 121 aa20.46■□□□□ 0.87
SSBP4-201ENST00000270061 FABP7O15540 132 aa20.46■□□□□ 0.87
SSBP4-201ENST00000270061 KCNJ3P48549 501 aa20.46■□□□□ 0.87
SSBP4-201ENST00000270061 MOB1BQ7L9L4 216 aa20.46■□□□□ 0.87
SSBP4-201ENST00000270061 MOGAT3Q86VF5 341 aa20.46■□□□□ 0.87
SSBP4-201ENST00000270061 OR14J1Q9UGF5 321 aa20.46■□□□□ 0.87
SSBP4-201ENST00000270061 TANC2Q9HCD6 1990 aa20.46■□□□□ 0.87
SSBP4-201ENST00000270061 PPIHO43447 177 aaKnown RBP20.46■□□□□ 0.87
SSBP4-201ENST00000270061 RP2O75695 350 aa20.46■□□□□ 0.87
SSBP4-201ENST00000270061 HLA-AP01891 365 aaKnown RBP20.46■□□□□ 0.87
SSBP4-201ENST00000270061 GLP1RP43220 463 aa20.46■□□□□ 0.87
SSBP4-201ENST00000270061 GCSAMQ8N6F7 178 aa20.46■□□□□ 0.87
SSBP4-201ENST00000270061 PLPPR1Q8TBJ4 325 aa20.46■□□□□ 0.87
SSBP4-201ENST00000270061 Q8TCH9 128 aa20.46■□□□□ 0.87
SSBP4-201ENST00000270061 IGHV1-69-2A0A0G2JMI3 117 aa20.45■□□□□ 0.86
SSBP4-201ENST00000270061 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.45■□□□□ 0.86
SSBP4-201ENST00000270061 OR2A4O95047 310 aa20.45■□□□□ 0.86
SSBP4-201ENST00000270061 AKR1C4P17516 323 aa20.45■□□□□ 0.86
SSBP4-201ENST00000270061 IL2RGP31785 369 aa20.45■□□□□ 0.86
SSBP4-201ENST00000270061 FCGR2CP31995 323 aa20.45■□□□□ 0.86
SSBP4-201ENST00000270061 UCP3P55916 312 aa20.45■□□□□ 0.86
SSBP4-201ENST00000270061 IL13RA1P78552 427 aa20.45■□□□□ 0.86
SSBP4-201ENST00000270061 ZFAND1Q8TCF1 268 aa20.45■□□□□ 0.86
SSBP4-201ENST00000270061 MITD1Q8WV92 249 aa20.45■□□□□ 0.86
SSBP4-201ENST00000270061 TMEM230Q96A57 120 aa20.45■□□□□ 0.86
SSBP4-201ENST00000270061 OR2A7Q96R45 310 aa20.45■□□□□ 0.86
SSBP4-201ENST00000270061 WIPI2Q9Y4P8 454 aa20.45■□□□□ 0.86
SSBP4-201ENST00000270061 DYSFO75923 2080 aa20.45■□□□□ 0.86
SSBP4-201ENST00000270061 RFPL4AA6NLU0 287 aa20.44■□□□□ 0.86
SSBP4-201ENST00000270061 RFPL4AL1F8VTS6 287 aa20.44■□□□□ 0.86
SSBP4-201ENST00000270061 CTSDP07339 412 aaPredicted RBP20.44■□□□□ 0.86
SSBP4-201ENST00000270061 SCTP09683 121 aa20.44■□□□□ 0.86
SSBP4-201ENST00000270061 EGR1P18146 543 aa20.44■□□□□ 0.86
SSBP4-201ENST00000270061 PRIMA1Q86XR5 153 aa20.44■□□□□ 0.86
SSBP4-201ENST00000270061 OR4A4PQ8NGN8 299 aa20.44■□□□□ 0.86
SSBP4-201ENST00000270061 EGLN1Q9GZT9 426 aa20.44■□□□□ 0.86
SSBP4-201ENST00000270061 GCM1Q9NP62 436 aa20.44■□□□□ 0.86
SSBP4-201ENST00000270061 TMEM160Q9NX00 188 aa20.44■□□□□ 0.86
SSBP4-201ENST00000270061 KCNS2Q9ULS6 477 aa20.44■□□□□ 0.86
SSBP4-201ENST00000270061 ATRQ13535 2644 aa20.44■□□□□ 0.86
SSBP4-201ENST00000270061 PSPNO60542 156 aa20.44■□□□□ 0.86
SSBP4-201ENST00000270061 DUS4LO95620 317 aaKnown RBP20.44■□□□□ 0.86
SSBP4-201ENST00000270061 TGFAP01135 160 aa20.44■□□□□ 0.86
SSBP4-201ENST00000270061 GIPP09681 153 aaPredicted RBP20.44■□□□□ 0.86
SSBP4-201ENST00000270061 PGAM2P15259 253 aa20.44■□□□□ 0.86
SSBP4-201ENST00000270061 ERP29P30040 261 aaKnown RBP20.44■□□□□ 0.86
SSBP4-201ENST00000270061 NKX2-5P52952 324 aaPredicted RBP20.44■□□□□ 0.86
SSBP4-201ENST00000270061 IGSF11Q5DX21 431 aa20.44■□□□□ 0.86
SSBP4-201ENST00000270061 MOB3AQ96BX8 217 aa20.44■□□□□ 0.86
SSBP4-201ENST00000270061 RANBP3Q9H6Z4 567 aaPredicted RBP20.44■□□□□ 0.86
SSBP4-201ENST00000270061 MBNL3Q9NUK0 354 aaKnown RBP20.44■□□□□ 0.86
SSBP4-201ENST00000270061 CDC42EP3Q9UKI2 254 aa20.44■□□□□ 0.86
SSBP4-201ENST00000270061 C14orf166Q9Y224 244 aaKnown RBP20.44■□□□□ 0.86
SSBP4-201ENST00000270061 CEBPDP49716 269 aaPredicted RBP20.43■□□□□ 0.86
SSBP4-201ENST00000270061 HLA-DRB3P79483 266 aa20.43■□□□□ 0.86
SSBP4-201ENST00000270061 PAX5Q02548 391 aa20.43■□□□□ 0.86
SSBP4-201ENST00000270061 BAMBIQ13145 260 aa20.43■□□□□ 0.86
SSBP4-201ENST00000270061 HFEQ30201 348 aa20.43■□□□□ 0.86
SSBP4-201ENST00000270061 SLC35E4Q6ICL7 350 aa20.43■□□□□ 0.86
SSBP4-201ENST00000270061 NLRC3Q7RTR2 1065 aa20.43■□□□□ 0.86
SSBP4-201ENST00000270061 ASB13Q8WXK3 278 aa20.43■□□□□ 0.86
SSBP4-201ENST00000270061 NARFLQ9H6Q4 476 aa20.43■□□□□ 0.86
SSBP4-201ENST00000270061 RNF7Q9UBF6 113 aa20.43■□□□□ 0.86
SSBP4-201ENST00000270061 TK1P04183 234 aa20.42■□□□□ 0.86
SSBP4-201ENST00000270061 PSG2P11465 335 aa20.42■□□□□ 0.86
SSBP4-201ENST00000270061 CD34P28906 385 aa20.42■□□□□ 0.86
SSBP4-201ENST00000270061 PRDX2P32119 198 aa20.42■□□□□ 0.86
SSBP4-201ENST00000270061 HOXA4Q00056 320 aaPredicted RBP20.42■□□□□ 0.86
SSBP4-201ENST00000270061 PHB2Q99623 299 aa20.42■□□□□ 0.86
SSBP4-201ENST00000270061 TMPRSS13Q9BYE2 586 aa20.42■□□□□ 0.86
SSBP4-201ENST00000270061 FXYD6Q9H0Q3 95 aa20.42■□□□□ 0.86
SSBP4-201ENST00000270061 PIPOXQ9P0Z9 390 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms