RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 C10orf128Q5T292 105 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 ASCL4Q6XD76 172 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 GAL3ST2Q9H3Q3 398 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 LPAR2Q9HBW0 351 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 KIR2DL5BA0A0G2JN68 375 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 KIR2DL5BA0A0G2JPC4 375 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 C10orf142B7Z368 130 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 LINC01565O15544 149 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 HRASP01112 189 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 UCP1P25874 307 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 ELLP55199 621 aaPredicted RBP12.86□□□□□ -0.35
XRCC1-201ENST00000262887 GNB2P62879 340 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 HIST1H3AP68431 136 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 KIR2DL5AQ8N109 375 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 GBGT1Q8N5D6 347 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 ZNF845Q96IR2 970 aaPredicted RBP12.86□□□□□ -0.35
XRCC1-201ENST00000262887 ELOVL1Q9BW60 279 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 TAAR3PQ9P1P4 343 aa12.86□□□□□ -0.35
XRCC1-201ENST00000262887 POLR3KQ9Y2Y1 108 aaPredicted RBP12.86□□□□□ -0.35
XRCC1-201ENST00000262887 A0A1W2PPC4 97 aa12.85□□□□□ -0.35
XRCC1-201ENST00000262887 ZNF737O75373 536 aa12.85□□□□□ -0.35
XRCC1-201ENST00000262887 NRASP01111 189 aa12.85□□□□□ -0.35
XRCC1-201ENST00000262887 MDH2P40926 338 aaKnown RBP12.85□□□□□ -0.35
XRCC1-201ENST00000262887 PTGDSP41222 190 aa12.85□□□□□ -0.35
XRCC1-201ENST00000262887 RPL29P47914 159 aaKnown RBP12.85□□□□□ -0.35
XRCC1-201ENST00000262887 RPL23P62829 140 aaKnown RBP12.85□□□□□ -0.35
XRCC1-201ENST00000262887 BTNL3Q6UXE8 466 aa12.85□□□□□ -0.35
XRCC1-201ENST00000262887 CENPVQ7Z7K6 275 aaPredicted RBP12.85□□□□□ -0.35
XRCC1-201ENST00000262887 BATF2Q8N1L9 274 aa12.85□□□□□ -0.35
XRCC1-201ENST00000262887 SVIPQ8NHG7 77 aa12.85□□□□□ -0.35
XRCC1-201ENST00000262887 LOC102725191A0A1B0GVB3 256 aa12.85□□□□□ -0.35
XRCC1-201ENST00000262887 SIAH2O43255 324 aa12.85□□□□□ -0.35
XRCC1-201ENST00000262887 DHHO43323 396 aa12.85□□□□□ -0.35
XRCC1-201ENST00000262887 KBTBD11O94819 623 aa12.85□□□□□ -0.35
XRCC1-201ENST00000262887 DLX2Q07687 328 aaPredicted RBP12.85□□□□□ -0.35
XRCC1-201ENST00000262887 PSMG3Q9BT73 122 aaPredicted RBP12.85□□□□□ -0.35
XRCC1-201ENST00000262887 NCOR1P1Q9H4R4 102 aa12.85□□□□□ -0.35
XRCC1-201ENST00000262887 LNP1A1A4G5 178 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 MAP1LC3B2A6NCE7 125 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 RBM11P57052 281 aaKnown RBP12.84□□□□□ -0.35
XRCC1-201ENST00000262887 ACSF3Q4G176 576 aaPredicted RBP12.84□□□□□ -0.35
XRCC1-201ENST00000262887 ANKRD37Q7Z713 158 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 NFAM1Q8NET5 270 aaPredicted RBP12.84□□□□□ -0.35
XRCC1-201ENST00000262887 OR2M3Q8NG83 312 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 RNASE8Q8TDE3 154 aaKnown RBP12.84□□□□□ -0.35
XRCC1-201ENST00000262887 RNF138Q8WVD3 245 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 MAP1LC3BQ9GZQ8 125 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 OR51I2Q9H344 312 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 CHD3Q12873 2000 aaKnown RBP12.84□□□□□ -0.35
XRCC1-201ENST00000262887 MED12Q93074 2177 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 LRRC3CA6NJW4 275 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 LCATP04180 440 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 SOX8P57073 446 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 OR1D5P58170 312 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 ETFRF1Q6IPR1 90 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 OR2T10Q8NGZ9 312 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 TMEM54Q969K7 222 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 RPUSD4Q96CM3 377 aaKnown RBP12.84□□□□□ -0.35
XRCC1-201ENST00000262887 NAGKQ9UJ70 344 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 IGLV3-32A0A0A0MS00 114 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 IGHV3-15A0A0B4J1V0 119 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 MEF2BQ02080 365 aaPredicted RBP12.84□□□□□ -0.35
XRCC1-201ENST00000262887 RTP5Q14D33 572 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 ZNF705AQ6ZN79 300 aaPredicted RBP12.84□□□□□ -0.35
XRCC1-201ENST00000262887 WFIKKN1Q96NZ8 548 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 IL36GQ9NZH8 169 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 OR6C3Q9NZP0 311 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 SPAG17Q6Q759 2223 aa12.84□□□□□ -0.35
XRCC1-201ENST00000262887 IGKV1D-13A0A0B4J2D9 117 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 NPIPA2E9PIF3 369 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 NPIPA3F8WFD2 350 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 IFNL4K9M1U5 179 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 IGKV1-13P0DP09 117 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 TMEM11P17152 192 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 OR10J1P30954 320 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 CNN1P51911 297 aaKnown RBP12.83□□□□□ -0.36
XRCC1-201ENST00000262887 SERF2P84101 59 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 PRSS8Q16651 343 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 TMEM41BQ5BJD5 291 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 FOXL2NBQ6ZUU3 175 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 CISD2Q8N5K1 135 aaKnown RBP12.83□□□□□ -0.36
XRCC1-201ENST00000262887 OR5D13Q8NGL4 314 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 RAB40CQ96S21 281 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 ULBP2Q9BZM5 246 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 PLK3Q9H4B4 646 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 CCL28Q9NRJ3 127 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 MMP17Q9ULZ9 603 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 KIAA2026Q5HYC2 2103 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 SLC22A20A6NK97 555 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 IRF2P14316 349 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 CD82P27701 267 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 BRS3P32247 399 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 ZNF295-AS1Q8N0V1 137 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 IL22RA2Q969J5 263 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 ANAPC16Q96DE5 110 aa12.83□□□□□ -0.36
XRCC1-201ENST00000262887 FER1L5A0AVI2 2057 aa12.82□□□□□ -0.36
XRCC1-201ENST00000262887 A0A0G2JRQ6 117 aa12.82□□□□□ -0.36
XRCC1-201ENST00000262887 CNOT4O95628 575 aaKnown RBP12.82□□□□□ -0.36
XRCC1-201ENST00000262887 SCTP09683 121 aa12.82□□□□□ -0.36
XRCC1-201ENST00000262887 CRYGSP22914 178 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms