RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 KIAA1456Q9P272 454 aa10.28□□□□□ -0.76
USHBP1-201ENST00000252597 ZIC3O60481 467 aa10.27□□□□□ -0.76
USHBP1-201ENST00000252597 IFNA10P01566 189 aa10.27□□□□□ -0.76
USHBP1-201ENST00000252597 CRYAAP02489 173 aa10.27□□□□□ -0.76
USHBP1-201ENST00000252597 NDUFB7P17568 137 aa10.27□□□□□ -0.76
USHBP1-201ENST00000252597 ARF1P84077 181 aaKnown RBP10.27□□□□□ -0.76
USHBP1-201ENST00000252597 SSX2Q16385 188 aa10.27□□□□□ -0.76
USHBP1-201ENST00000252597 FAM27BQ5VT28 67 aa10.27□□□□□ -0.76
USHBP1-201ENST00000252597 SPINK14Q6IE38 97 aa10.27□□□□□ -0.76
USHBP1-201ENST00000252597 GALNT14Q96FL9 552 aa10.27□□□□□ -0.76
USHBP1-201ENST00000252597 FOXD3Q9UJU5 478 aaPredicted RBP10.27□□□□□ -0.76
USHBP1-201ENST00000252597 KIAA1324LA8MWY0 1029 aaPredicted RBP10.27□□□□□ -0.77
USHBP1-201ENST00000252597 PATE3B3GLJ2 98 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 SEC14L6B5MCN3 397 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 CLDN34H7C241 214 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 SCGB1D1O95968 90 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 LIFP15018 202 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 DTYMKP23919 212 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 SUCLG1P53597 346 aaKnown RBP10.27□□□□□ -0.77
USHBP1-201ENST00000252597 HIKESHIQ53FT3 197 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 Q6ZPA2 131 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 LINC00696Q6ZRV3 163 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 GATAD1Q8WUU5 269 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 GPR146Q96CH1 333 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 OR2H1Q9GZK4 316 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 RBKSQ9H477 322 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 LYRM2Q9NU23 88 aaPredicted RBP10.27□□□□□ -0.77
USHBP1-201ENST00000252597 TMEM38BQ9NVV0 291 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 ANAPC10Q9UM13 185 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 DMRT1Q9Y5R6 373 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 TMEM265A0A087WTH1 108 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 PPIHO43447 177 aaKnown RBP10.27□□□□□ -0.77
USHBP1-201ENST00000252597 TFF1P04155 84 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 GRPP07492 148 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 HOXB1P14653 301 aaPredicted RBP10.27□□□□□ -0.77
USHBP1-201ENST00000252597 VDAC1P21796 283 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 CA6P23280 308 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 FAM53AQ6NSI3 398 aaPredicted RBP10.27□□□□□ -0.77
USHBP1-201ENST00000252597 CPEB3Q8NE35 698 aaKnown RBP10.27□□□□□ -0.77
USHBP1-201ENST00000252597 EGLN1Q9GZT9 426 aa10.27□□□□□ -0.77
USHBP1-201ENST00000252597 LOC102725191A0A1B0GVB3 256 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 MAP1LC3B2A6NCE7 125 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 NPIPB13A6NJU9 1138 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 ZNF729A6NN14 1252 aaPredicted RBP10.26□□□□□ -0.77
USHBP1-201ENST00000252597 ZNF705FA8MVS1 300 aaPredicted RBP10.26□□□□□ -0.77
USHBP1-201ENST00000252597 NPIPB4C9JG80 1138 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 VAMP5O95183 116 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 ZNF705DP0CH99 300 aaPredicted RBP10.26□□□□□ -0.77
USHBP1-201ENST00000252597 ZNF705BP0CI00 300 aaPredicted RBP10.26□□□□□ -0.77
USHBP1-201ENST00000252597 CD33P20138 364 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 DSCR4P56555 118 aaPredicted RBP10.26□□□□□ -0.77
USHBP1-201ENST00000252597 FAM3BP58499 235 aaPredicted RBP10.26□□□□□ -0.77
USHBP1-201ENST00000252597 BAXQ07812 192 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 NCR3LG1Q68D85 454 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 OR4D5Q8NGN0 318 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 ABHD5Q8WTS1 349 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 ELOVL1Q9BW60 279 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 SCRT1Q9BWW7 348 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 MAP1LC3BQ9GZQ8 125 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 TREM2Q9NZC2 230 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 MGAQ8IWI9 3026 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 XKRY2A2RUG3 117 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 H7BYZ3 331 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 HBE1P02100 147 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 RFESDQ8TAC1 157 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 ADGRG7Q96K78 797 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 WNT5BQ9H1J7 359 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 ZNF552Q9H707 407 aaPredicted RBP10.26□□□□□ -0.77
USHBP1-201ENST00000252597 UCK1Q9HA47 277 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 FUT9Q9Y231 359 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 ADAMTS9Q9P2N4 1935 aa10.26□□□□□ -0.77
USHBP1-201ENST00000252597 FOXI3A8MTJ6 420 aaPredicted RBP10.25□□□□□ -0.77
USHBP1-201ENST00000252597 RRP8O43159 456 aaKnown RBP10.25□□□□□ -0.77
USHBP1-201ENST00000252597 SYNGR3O43761 229 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 PITX3O75364 302 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 CDS2O95674 445 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 IGLV3-19P01714 112 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 APLNRP35414 380 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 CEBPDP49716 269 aaPredicted RBP10.25□□□□□ -0.77
USHBP1-201ENST00000252597 TPRX1Q8N7U7 411 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 CLDND2Q8NHS1 167 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 ATP5SQ99766 215 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 PCGF1Q9BSM1 259 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 OPA3Q9H6K4 179 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 MSL2Q9HCI7 577 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 Q9N2K0 584 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 DEFB108AA8MXU0 73 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 PPP5D1E7EU14 171 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 GALR2O43603 387 aaPredicted RBP10.25□□□□□ -0.77
USHBP1-201ENST00000252597 PGLYRP1O75594 196 aaPredicted RBP10.25□□□□□ -0.77
USHBP1-201ENST00000252597 PMS2P11Q13670 270 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 BTNL3Q6UXE8 466 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 C20orf204Q6ZNR8 217 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 Q6ZRM9 215 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 LURAP1Q96LR2 239 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 CHD3Q12873 2000 aaKnown RBP10.25□□□□□ -0.77
USHBP1-201ENST00000252597 CLEC18AA5D8T8 446 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 LILRA1O75019 489 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 ZNF737O75373 536 aa10.25□□□□□ -0.77
USHBP1-201ENST00000252597 DDTP30046 118 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms