RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 CMTM1Q8IZ96 169 aa8.65□□□□□ -1.03
COPB1-201ENST00000249923 OR5C1Q8NGR4 320 aa8.65□□□□□ -1.03
COPB1-201ENST00000249923 TMEM222Q9H0R3 208 aa8.65□□□□□ -1.03
COPB1-201ENST00000249923 ZNF703Q9H7S9 590 aaPredicted RBP8.65□□□□□ -1.03
COPB1-201ENST00000249923 ZNF286AQ9HBT8 521 aa8.65□□□□□ -1.03
COPB1-201ENST00000249923 WSB1Q9Y6I7 421 aa8.65□□□□□ -1.03
COPB1-201ENST00000249923 C3orf85A0A1B0GTC6 90 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 A0A1W2PPQ1 181 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 PROB1E7EW31 1015 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 SYNGR1O43759 233 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 GPR137BO60478 399 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 IAPPP10997 89 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 CXorf66Q5JRM2 361 aaPredicted RBP8.64□□□□□ -1.03
COPB1-201ENST00000249923 TMEM211Q6ICI0 200 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 TBC1D26Q86UD7 250 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 LGI3Q8N145 548 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 EXTL1Q92935 676 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 SDSLQ96GA7 329 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 IGKV3D-15A0A087WSY6 115 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 A0A0G2JRQ6 117 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 K7N7A8 449 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 SEC11BP0C7V7 166 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 EWSR1Q01844 656 aaKnown RBP eCLIP8.64□□□□□ -1.031e-10■■■■□ 21.5
COPB1-201ENST00000249923 C3AR1Q16581 482 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 ZNF705AQ6ZN79 300 aaPredicted RBP8.64□□□□□ -1.03
COPB1-201ENST00000249923 CPNE4Q96A23 557 aaPredicted RBP8.64□□□□□ -1.03
COPB1-201ENST00000249923 Q9N2K0 584 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 FOXJ2Q9P0K8 574 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 TRAV39A0A0B4J263 110 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 ARGFXA6NJG6 315 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 SLC22A20A6NK97 555 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 RPL36A-HNRNPH2H7BZ11 118 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 SNRPCP09234 159 aaKnown RBP8.64□□□□□ -1.03
COPB1-201ENST00000249923 PGA5P0DJD9 388 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 ERVS71-1P61550 626 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 MALLQ13021 153 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 PRDX4Q13162 271 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 PCSK4Q6UW60 755 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 GAPTQ8N292 157 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 TMEM45BQ96B21 275 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 CABLES2Q9BTV7 478 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 PLK3Q9H4B4 646 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 CALHM2Q9HA72 323 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 MSL2Q9HCI7 577 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 KCNS2Q9ULS6 477 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 POMT1Q9Y6A1 747 aa8.64□□□□□ -1.03
COPB1-201ENST00000249923 C5orf49A4QMS7 147 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 C9orf172C9J069 976 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 CYB561P49447 251 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 TMEM267Q0VDI3 215 aaPredicted RBP8.63□□□□□ -1.03
COPB1-201ENST00000249923 NMSQ5H8A3 153 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 SELENOHQ8IZQ5 122 aaKnown RBP8.63□□□□□ -1.03
COPB1-201ENST00000249923 TMEM56Q96MV1 263 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 ZNF391Q9UJN7 358 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 LAMP3Q9UQV4 416 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 LOXL2Q9Y4K0 774 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 TMEM56-RWDD3S4R434 201 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 TMEM265A0A087WTH1 108 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 TRDCB7Z8K6 153 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 TUSC2O75896 110 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 GPX4P36969 197 aaPredicted RBP8.63□□□□□ -1.03
COPB1-201ENST00000249923 PLA2G5P39877 138 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 NKX2-1P43699 371 aaPredicted RBP8.63□□□□□ -1.03
COPB1-201ENST00000249923 OR8G2PQ6IF36 304 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 UNQ6494/PRO21346Q6UXR6 183 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 SCGB1C1Q8TD33 95 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 PLSCR2Q9NRY7 297 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 PLA2G3Q9NZ20 509 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 B4E171 279 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 IGLV2-14P01704 120 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 TSPAN7P41732 249 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 MAGEA5P43359 124 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 RPS23P62266 143 aaKnown RBP8.63□□□□□ -1.03
COPB1-201ENST00000249923 ZNF154Q13106 437 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 IL13RA2Q14627 380 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 SPSB3Q6PJ21 355 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 Q6ZS49 121 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 VASH2Q86V25 355 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 LILRB2Q8N423 598 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 PACRGQ96M98 296 aaPredicted RBP8.63□□□□□ -1.03
COPB1-201ENST00000249923 IER2Q9BTL4 223 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 TUBG2Q9NRH3 451 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 NOSIPQ9Y314 301 aaKnown RBP8.63□□□□□ -1.03
COPB1-201ENST00000249923 GTF3C1Q12789 2109 aa8.63□□□□□ -1.03
COPB1-201ENST00000249923 C19orf67A6NJJ6 358 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 SERPINA7P05543 415 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 WNT5AP41221 380 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 PMP22Q01453 160 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 TGIF2LXQ8IUE1 241 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 OR2M7Q8NG81 312 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 GUCD1Q96NT3 240 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 CCL28Q9NRJ3 127 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 TAAR3PQ9P1P4 343 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 MRPS18CQ9Y3D5 142 aaKnown RBP8.62□□□□□ -1.03
COPB1-201ENST00000249923 KALRNO60229 2985 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 RBFOX3A6NFN3 312 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 FAM166BA8MTA8 275 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 ADAM20O43506 726 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 CDS2O95674 445 aa8.62□□□□□ -1.03
COPB1-201ENST00000249923 IFNA5P01569 189 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms