RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 RNASE11Q8TAA1 199 aaKnown RBP21.71■■□□□ 1.07
RAB40C-201ENST00000248139 PBDC1Q9BVG4 233 aa21.71■■□□□ 1.07
RAB40C-201ENST00000248139 DDA1Q9BW61 102 aa21.71■■□□□ 1.07
RAB40C-201ENST00000248139 OR2W1Q9Y3N9 320 aa21.71■■□□□ 1.07
RAB40C-201ENST00000248139 C1orf196B1AJZ1 125 aa21.71■■□□□ 1.07
RAB40C-201ENST00000248139 DEGS1O15121 323 aa21.71■■□□□ 1.07
RAB40C-201ENST00000248139 HMGN3Q15651 99 aa21.71■■□□□ 1.07
RAB40C-201ENST00000248139 SOHLH1Q5JUK2 328 aa21.71■■□□□ 1.07
RAB40C-201ENST00000248139 WDR86Q86TI4 376 aa21.71■■□□□ 1.07
RAB40C-201ENST00000248139 ZNF295-AS1Q8N0V1 137 aa21.71■■□□□ 1.07
RAB40C-201ENST00000248139 BCL2L14Q9BZR8 327 aa21.71■■□□□ 1.07
RAB40C-201ENST00000248139 SLC25A31Q9H0C2 315 aa21.71■■□□□ 1.07
RAB40C-201ENST00000248139 RNF115Q9Y4L5 304 aa21.71■■□□□ 1.07
RAB40C-201ENST00000248139 ZNF727A8MUV8 499 aa21.7■■□□□ 1.06
RAB40C-201ENST00000248139 SP1P08047 785 aa21.7■■□□□ 1.06
RAB40C-201ENST00000248139 COX5BP10606 129 aa21.7■■□□□ 1.06
RAB40C-201ENST00000248139 IAPPP10997 89 aa21.7■■□□□ 1.06
RAB40C-201ENST00000248139 HNF4GQ14541 408 aa21.7■■□□□ 1.06
RAB40C-201ENST00000248139 DBX2Q6ZNG2 339 aa21.7■■□□□ 1.06
RAB40C-201ENST00000248139 DEFB123Q8N688 67 aa21.7■■□□□ 1.06
RAB40C-201ENST00000248139 ABI3Q9P2A4 366 aa21.7■■□□□ 1.06
RAB40C-201ENST00000248139 RBFOX3A6NFN3 312 aa21.7■■□□□ 1.06
RAB40C-201ENST00000248139 SERPINE2P07093 398 aa21.7■■□□□ 1.06
RAB40C-201ENST00000248139 CEBPDP49716 269 aaPredicted RBP21.7■■□□□ 1.06
RAB40C-201ENST00000248139 EGLN1Q9GZT9 426 aa21.7■■□□□ 1.06
RAB40C-201ENST00000248139 H0Y980 276 aa21.69■■□□□ 1.06
RAB40C-201ENST00000248139 ZNF573Q86YE8 665 aa21.69■■□□□ 1.06
RAB40C-201ENST00000248139 OR5D13Q8NGL4 314 aa21.69■■□□□ 1.06
RAB40C-201ENST00000248139 RBM7Q9Y580 266 aaKnown RBP21.69■■□□□ 1.06
RAB40C-201ENST00000248139 TXNL1O43396 289 aa21.69■■□□□ 1.06
RAB40C-201ENST00000248139 CNOT4O95628 575 aaKnown RBP21.69■■□□□ 1.06
RAB40C-201ENST00000248139 IGKV1-39P01597 117 aa21.69■■□□□ 1.06
RAB40C-201ENST00000248139 IGKV1D-39P04432 117 aa21.69■■□□□ 1.06
RAB40C-201ENST00000248139 ACAA1P09110 424 aaPredicted RBP21.69■■□□□ 1.06
RAB40C-201ENST00000248139 PMP22Q01453 160 aa21.69■■□□□ 1.06
RAB40C-201ENST00000248139 WISP2O76076 250 aa21.68■■□□□ 1.06
RAB40C-201ENST00000248139 HLA-DRB3P79483 266 aa21.68■■□□□ 1.06
RAB40C-201ENST00000248139 TMEM164Q5U3C3 297 aa21.68■■□□□ 1.06
RAB40C-201ENST00000248139 THNSL2Q86YJ6 484 aa21.68■■□□□ 1.06
RAB40C-201ENST00000248139 GCNT2Q8N0V5 402 aa21.68■■□□□ 1.06
RAB40C-201ENST00000248139 OR51I2Q9H344 312 aa21.68■■□□□ 1.06
RAB40C-201ENST00000248139 H0YL77 283 aa21.68■■□□□ 1.06
RAB40C-201ENST00000248139 IGLV2-14P01704 120 aa21.68■■□□□ 1.06
RAB40C-201ENST00000248139 MT-ND4LP03901 98 aa21.68■■□□□ 1.06
RAB40C-201ENST00000248139 TFF1P04155 84 aa21.68■■□□□ 1.06
RAB40C-201ENST00000248139 EIF2S3LQ2VIR3 472 aaKnown RBP21.68■■□□□ 1.06
RAB40C-201ENST00000248139 OR1K1Q8NGR3 316 aa21.68■■□□□ 1.06
RAB40C-201ENST00000248139 OR2J1Q9GZK6 312 aa21.68■■□□□ 1.06
RAB40C-201ENST00000248139 MEOX2P50222 304 aa21.67■■□□□ 1.06
RAB40C-201ENST00000248139 SLC10A1Q14973 349 aa21.67■■□□□ 1.06
RAB40C-201ENST00000248139 H1FOOQ8IZA3 346 aaPredicted RBP21.67■■□□□ 1.06
RAB40C-201ENST00000248139 RSG1Q9BU20 258 aa21.67■■□□□ 1.06
RAB40C-201ENST00000248139 SPRR3Q9UBC9 169 aa21.67■■□□□ 1.06
RAB40C-201ENST00000248139 KCNS2Q9ULS6 477 aa21.67■■□□□ 1.06
RAB40C-201ENST00000248139 CDIPTO14735 213 aa21.67■■□□□ 1.06
RAB40C-201ENST00000248139 HSPA12AO43301 675 aa21.67■■□□□ 1.06
RAB40C-201ENST00000248139 CTXN2P0C2S0 81 aa21.67■■□□□ 1.06
RAB40C-201ENST00000248139 ZNF14P17017 642 aaPredicted RBP21.67■■□□□ 1.06
RAB40C-201ENST00000248139 SRSF7Q16629 238 aaKnown RBP eCLIP21.67■■□□□ 1.06
RAB40C-201ENST00000248139 FAM180AQ6UWF9 173 aa21.67■■□□□ 1.06
RAB40C-201ENST00000248139 SLC16A13Q7RTY0 426 aa21.67■■□□□ 1.06
RAB40C-201ENST00000248139 CACNG5Q9UF02 275 aa21.67■■□□□ 1.06
RAB40C-201ENST00000248139 WDR1O75083 606 aa21.66■■□□□ 1.06
RAB40C-201ENST00000248139 S100A6P06703 90 aa21.66■■□□□ 1.06
RAB40C-201ENST00000248139 FOLR2P14207 255 aa21.66■■□□□ 1.06
RAB40C-201ENST00000248139 RAB5AP20339 215 aa21.66■■□□□ 1.06
RAB40C-201ENST00000248139 Q6P435 159 aa21.66■■□□□ 1.06
RAB40C-201ENST00000248139 SVILO95425 2214 aa21.66■■□□□ 1.06
RAB40C-201ENST00000248139 CLEC18AA5D8T8 446 aa21.66■■□□□ 1.06
RAB40C-201ENST00000248139 TNFSF15O95150 251 aa21.66■■□□□ 1.06
RAB40C-201ENST00000248139 CD59P13987 128 aa21.66■■□□□ 1.06
RAB40C-201ENST00000248139 IDH3GP51553 393 aaPredicted RBP21.66■■□□□ 1.06
RAB40C-201ENST00000248139 CXorf67Q86X51 503 aaPredicted RBP21.66■■□□□ 1.06
RAB40C-201ENST00000248139 CLEC18CQ8NCF0 446 aa21.66■■□□□ 1.06
RAB40C-201ENST00000248139 OR10V1Q8NGI7 309 aa21.66■■□□□ 1.06
RAB40C-201ENST00000248139 BCL2L2Q92843 193 aaPredicted RBP21.66■■□□□ 1.06
RAB40C-201ENST00000248139 TRAPPC2LQ9UL33 140 aa21.66■■□□□ 1.06
RAB40C-201ENST00000248139 MPC1Q9Y5U8 109 aa21.66■■□□□ 1.06
RAB40C-201ENST00000248139 OR2H2O95918 312 aa21.65■■□□□ 1.06
RAB40C-201ENST00000248139 RNPS1Q15287 305 aaKnown RBP21.65■■□□□ 1.06
RAB40C-201ENST00000248139 TESK1Q15569 626 aa21.65■■□□□ 1.06
RAB40C-201ENST00000248139 SLC25A24Q6NUK1 477 aa21.65■■□□□ 1.06
RAB40C-201ENST00000248139 GPR87Q9BY21 358 aa21.65■■□□□ 1.06
RAB40C-201ENST00000248139 VSIRQ9H7M9 311 aa21.65■■□□□ 1.06
RAB40C-201ENST00000248139 GRPP07492 148 aa21.65■■□□□ 1.06
RAB40C-201ENST00000248139 METTL15P1P0C7V9 234 aa21.65■■□□□ 1.06
RAB40C-201ENST00000248139 RPS23P62266 143 aaKnown RBP21.65■■□□□ 1.06
RAB40C-201ENST00000248139 ARL16Q0P5N6 197 aa21.65■■□□□ 1.06
RAB40C-201ENST00000248139 IL24Q13007 206 aa21.65■■□□□ 1.06
RAB40C-201ENST00000248139 AKR1C8PQ5T2L2 129 aa21.65■■□□□ 1.06
RAB40C-201ENST00000248139 CYB561D1Q8N8Q1 229 aa21.65■■□□□ 1.06
RAB40C-201ENST00000248139 OR1J1Q8NGS3 322 aa21.65■■□□□ 1.06
RAB40C-201ENST00000248139 MMP24Q9Y5R2 645 aa21.65■■□□□ 1.06
RAB40C-201ENST00000248139 PCNX2A6NKB5 2137 aa21.65■■□□□ 1.06
RAB40C-201ENST00000248139 KIAA1324LA8MWY0 1029 aaPredicted RBP21.64■■□□□ 1.06
RAB40C-201ENST00000248139 SCCPDHQ8NBX0 429 aa21.64■■□□□ 1.06
RAB40C-201ENST00000248139 POM121Q96HA1 1249 aa21.64■■□□□ 1.06
RAB40C-201ENST00000248139 OR14J1Q9UGF5 321 aa21.64■■□□□ 1.06
RAB40C-201ENST00000248139 DOCK11Q5JSL3 2073 aa21.64■■□□□ 1.06
RAB40C-201ENST00000248139 OR5B21A6NL26 309 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms