RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 IGLV3-1P01715 115 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 IAPPP10997 89 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 SPINK2P20155 84 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 CHRNA7P36544 502 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 TNFSF10P50591 281 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 PAX9P55771 341 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 SNAI3Q3KNW1 292 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 TOMM20LQ6UXN7 152 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 SNIP1Q8TAD8 396 aaKnown RBP12.09□□□□□ -0.47
SF1-201ENST00000227503 ATP5SQ99766 215 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 TMEM242Q9NWH2 141 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 AQP7P3A6NL99 342 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 HSPB6O14558 160 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 PPYP01298 95 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 LCATP04180 440 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 CTSSP25774 331 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 RPL23P62829 140 aaKnown RBP12.09□□□□□ -0.47
SF1-201ENST00000227503 GRB2P62993 217 aaKnown RBP12.09□□□□□ -0.47
SF1-201ENST00000227503 SELENOHQ8IZQ5 122 aaKnown RBP12.09□□□□□ -0.47
SF1-201ENST00000227503 TMEM170AQ8WVE7 144 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 SIGLEC12Q96PQ1 595 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 SLC7A10Q9NS82 523 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 CEP192Q8TEP8 1941 aa12.09□□□□□ -0.47
SF1-201ENST00000227503 LOC102725191A0A1B0GVB3 256 aa12.08□□□□□ -0.47
SF1-201ENST00000227503 METTL15P1P0C7V9 234 aa12.08□□□□□ -0.47
SF1-201ENST00000227503 EGR1P18146 543 aa12.08□□□□□ -0.47
SF1-201ENST00000227503 GCH1P30793 250 aa12.08□□□□□ -0.47
SF1-201ENST00000227503 ARL16Q0P5N6 197 aa12.08□□□□□ -0.47
SF1-201ENST00000227503 FAM189A2Q15884 450 aa12.08□□□□□ -0.47
SF1-201ENST00000227503 BSXQ3C1V8 233 aa12.08□□□□□ -0.47
SF1-201ENST00000227503 Q6ZVH6 145 aa12.08□□□□□ -0.47
SF1-201ENST00000227503 GBGT1Q8N5D6 347 aa12.08□□□□□ -0.47
SF1-201ENST00000227503 FADS6Q8N9I5 356 aa12.08□□□□□ -0.47
SF1-201ENST00000227503 MOB3AQ96BX8 217 aa12.08□□□□□ -0.47
SF1-201ENST00000227503 RASL10BQ96S79 203 aa12.08□□□□□ -0.47
SF1-201ENST00000227503 PHF7Q9BWX1 381 aaPredicted RBP12.08□□□□□ -0.47
SF1-201ENST00000227503 TMEM222Q9H0R3 208 aa12.08□□□□□ -0.47
SF1-201ENST00000227503 KIR2DL5BA0A0G2JN68 375 aa12.08□□□□□ -0.48
SF1-201ENST00000227503 KIR2DL5BA0A0G2JPC4 375 aa12.08□□□□□ -0.48
SF1-201ENST00000227503 BRS3P32247 399 aa12.08□□□□□ -0.48
SF1-201ENST00000227503 ANKRD39Q53RE8 183 aa12.08□□□□□ -0.48
SF1-201ENST00000227503 ZNF818PQ6ZRF7 136 aa12.08□□□□□ -0.48
SF1-201ENST00000227503 TCF23Q7RTU1 214 aa12.08□□□□□ -0.48
SF1-201ENST00000227503 KIR2DL5AQ8N109 375 aa12.08□□□□□ -0.48
SF1-201ENST00000227503 OR1K1Q8NGR3 316 aa12.08□□□□□ -0.48
SF1-201ENST00000227503 MS4A10Q96PG2 267 aa12.08□□□□□ -0.48
SF1-201ENST00000227503 OR5B12Q96R08 314 aa12.08□□□□□ -0.48
SF1-201ENST00000227503 ZNF286AQ9HBT8 521 aa12.08□□□□□ -0.48
SF1-201ENST00000227503 IGKV1-12A0A0C4DH73 117 aa12.08□□□□□ -0.48
SF1-201ENST00000227503 SIAH2O43255 324 aa12.08□□□□□ -0.48
SF1-201ENST00000227503 IGKV1D-12P01611 117 aa12.08□□□□□ -0.48
SF1-201ENST00000227503 COA6Q5JTJ3 125 aaKnown RBP12.08□□□□□ -0.48
SF1-201ENST00000227503 GAPTQ8N292 157 aa12.08□□□□□ -0.48
SF1-201ENST00000227503 SPACA9Q96E40 222 aaPredicted RBP12.08□□□□□ -0.48
SF1-201ENST00000227503 PARD6AQ9NPB6 346 aa12.08□□□□□ -0.48
SF1-201ENST00000227503 GTF3C1Q12789 2109 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 IGKV1D-13A0A0B4J2D9 117 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 C3orf80F5H4A9 247 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 TP53I11O14683 189 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 LILRA1O75019 489 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 DHRS3O75911 302 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 IGKV1-13P0DP09 117 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 ZNF133P52736 654 aaPredicted RBP12.07□□□□□ -0.48
SF1-201ENST00000227503 EIF3IQ13347 325 aaKnown RBP12.07□□□□□ -0.48
SF1-201ENST00000227503 ZNF573Q86YE8 665 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 MSL2Q9HCI7 577 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 V9GYS6 101 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 ZNF737O75373 536 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 CDS2O95674 445 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 CDKN1AP38936 164 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 TMEM241Q24JQ0 296 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 RSPO1Q2MKA7 263 aaPredicted RBP12.07□□□□□ -0.48
SF1-201ENST00000227503 ACTL10Q5JWF8 245 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 PHYHD1Q5SRE7 291 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 H1FOOQ8IZA3 346 aaPredicted RBP12.07□□□□□ -0.48
SF1-201ENST00000227503 ZNF295-AS1Q8N0V1 137 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 ZNF442Q9H7R0 627 aa12.07□□□□□ -0.48
SF1-201ENST00000227503 CHCHD2Q9Y6H1 151 aaPredicted RBP12.07□□□□□ -0.48
SF1-201ENST00000227503 A0A1W2PQM1 296 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 MAP1LC3B2A6NCE7 125 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 PDLIM4P50479 330 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 CNN1P51911 297 aaKnown RBP12.06□□□□□ -0.48
SF1-201ENST00000227503 RPS16P62249 146 aaKnown RBP12.06□□□□□ -0.48
SF1-201ENST00000227503 ZNF92Q03936 586 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 ALKBH2Q6NS38 261 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 CCDC71LQ8N9Z2 235 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 NBEAQ8NFP9 2946 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 RNASE8Q8TDE3 154 aaKnown RBP12.06□□□□□ -0.48
SF1-201ENST00000227503 MAP1LC3BQ9GZQ8 125 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 TAAR3PQ9P1P4 343 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 NAT8Q9UHE5 227 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 RARRES3Q9UL19 164 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 IFNA5P01569 189 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 ENDOGQ14249 297 aaKnown RBP12.06□□□□□ -0.48
SF1-201ENST00000227503 FAM78BQ5VT40 261 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 PRAMEF20Q5VT98 475 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 GUSBP11Q6P575 273 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 PYGO2Q9BRQ0 406 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 SLC25A22Q9H936 323 aa12.06□□□□□ -0.48
SF1-201ENST00000227503 AKIRIN1Q9H9L7 192 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms