RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 WDR61Q9GZS3 305 aaKnown RBP10.01□□□□□ -0.81
NOD1-201ENST00000222823 ARL2-SNX15V9GYD0 113 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 LOC102723971A0A1B0GUV8 181 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 OR4A8P0C604 315 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 AESQ08117 197 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 STPG1Q5TH74 334 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 ZBTB34Q8NCN2 500 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 BLNKQ8WV28 456 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 FAM210BQ96KR6 192 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 CREBBPQ92793 2442 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 TMEM210A6NLX4 147 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 PGA4P0DJD7 388 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 GALR1P47211 349 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 ZNF260Q3ZCT1 412 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 LPAR5Q9H1C0 372 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 IGF2P01344 180 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 UBE2L3P68036 154 aaKnown RBP10.01□□□□□ -0.81
NOD1-201ENST00000222823 BSXQ3C1V8 233 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 MYPOPQ86VE0 399 aaPredicted RBP10.01□□□□□ -0.81
NOD1-201ENST00000222823 PILRBQ9UKJ0 227 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 KLK13Q9UKR3 277 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 VSIG4Q9Y279 399 aa10.01□□□□□ -0.81
NOD1-201ENST00000222823 A0A1W2PR77 199 aa10□□□□□ -0.81
NOD1-201ENST00000222823 MBPP02686 304 aaPredicted RBP10□□□□□ -0.81
NOD1-201ENST00000222823 GYPAP02724 150 aa10□□□□□ -0.81
NOD1-201ENST00000222823 FOSL1P15407 271 aa10□□□□□ -0.81
NOD1-201ENST00000222823 SULT1A1P50225 295 aa10□□□□□ -0.81
NOD1-201ENST00000222823 EWSR1Q01844 656 aaKnown RBP eCLIP10□□□□□ -0.81
NOD1-201ENST00000222823 SLC25A47Q6Q0C1 308 aa10□□□□□ -0.81
NOD1-201ENST00000222823 FAM219AQ8IW50 185 aa10□□□□□ -0.81
NOD1-201ENST00000222823 LOXL4Q96JB6 756 aa10□□□□□ -0.81
NOD1-201ENST00000222823 MS4A18H0YCH9 400 aa10□□□□□ -0.81
NOD1-201ENST00000222823 GOSR1O95249 250 aa10□□□□□ -0.81
NOD1-201ENST00000222823 ZNF250P15622 560 aa10□□□□□ -0.81
NOD1-201ENST00000222823 SUMO1P63165 101 aaKnown RBP10□□□□□ -0.81
NOD1-201ENST00000222823 PNRC1Q12796 327 aaPredicted RBP10□□□□□ -0.81
NOD1-201ENST00000222823 MS4A18Q3C1V0 323 aa10□□□□□ -0.81
NOD1-201ENST00000222823 UNQ9370/PRO34162Q6UXP9 181 aa10□□□□□ -0.81
NOD1-201ENST00000222823 SSX7Q7RTT5 188 aa10□□□□□ -0.81
NOD1-201ENST00000222823 BVESQ8NE79 360 aa10□□□□□ -0.81
NOD1-201ENST00000222823 OR52L2PQ8NGH6 319 aa10□□□□□ -0.81
NOD1-201ENST00000222823 RCC2Q9P258 522 aaKnown RBP10□□□□□ -0.81
NOD1-201ENST00000222823 SCN8AQ9UQD0 1980 aa10□□□□□ -0.81
NOD1-201ENST00000222823 A0A1B0GU03 582 aa10□□□□□ -0.81
NOD1-201ENST00000222823 NKX2-8O15522 239 aa10□□□□□ -0.81
NOD1-201ENST00000222823 GATCO43716 136 aaKnown RBP10□□□□□ -0.81
NOD1-201ENST00000222823 FCGR3AP08637 254 aa10□□□□□ -0.81
NOD1-201ENST00000222823 BRS3P32247 399 aa10□□□□□ -0.81
NOD1-201ENST00000222823 TPPP2P59282 170 aa10□□□□□ -0.81
NOD1-201ENST00000222823 C19orf57Q0VDD7 668 aa10□□□□□ -0.81
NOD1-201ENST00000222823 GAMTQ14353 236 aa10□□□□□ -0.81
NOD1-201ENST00000222823 TGIF1Q15583 401 aa10□□□□□ -0.81
NOD1-201ENST00000222823 TEX30Q5JUR7 227 aa10□□□□□ -0.81
NOD1-201ENST00000222823 VAX1Q5SQQ9 334 aa10□□□□□ -0.81
NOD1-201ENST00000222823 FAM78BQ5VT40 261 aa10□□□□□ -0.81
NOD1-201ENST00000222823 SLC24A4Q8NFF2 622 aa10□□□□□ -0.81
NOD1-201ENST00000222823 FGF11Q92914 225 aa10□□□□□ -0.81
NOD1-201ENST00000222823 SOSTQ9BQB4 213 aa10□□□□□ -0.81
NOD1-201ENST00000222823 INSIG2Q9Y5U4 225 aa10□□□□□ -0.81
NOD1-201ENST00000222823 P2RY6Q15077 328 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 CEACAM21Q3KPI0 293 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 FA2HQ7L5A8 372 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 LINC00596Q86U02 117 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 KLHDC1Q8N7A1 406 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 SSMEM1Q8WWF3 244 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 MS4A3Q96HJ5 214 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 NOL4LQ96MY1 436 aaPredicted RBP9.99□□□□□ -0.81
NOD1-201ENST00000222823 SPSB2Q99619 263 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 K7ESF4 209 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 FTH1P19P0C7X4 201 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 SMIM17P0DL12 118 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 PMCHP20382 165 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 SNRPEP62304 92 aaKnown RBP9.99□□□□□ -0.81
NOD1-201ENST00000222823 HIST1H3AP68431 136 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 IGLV3-21P80748 117 aaPredicted RBP9.99□□□□□ -0.81
NOD1-201ENST00000222823 SPNS3Q6ZMD2 512 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 HARBI1Q96MB7 349 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 TMEM167BQ9NRX6 74 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 PIPOXQ9P0Z9 390 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 YTHDF2Q9Y5A9 579 aaKnown RBP9.99□□□□□ -0.81
NOD1-201ENST00000222823 LYZP61626 148 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 RPL31P62899 125 aaKnown RBP9.99□□□□□ -0.81
NOD1-201ENST00000222823 CCL8P80075 99 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 C1orf100Q5SVJ3 147 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 RIPPLY2Q5TAB7 128 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 SLC23A3Q6PIS1 610 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 OR8B3Q8NGG8 313 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 OR10D4PQ8NGN7 298 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 LINC00052Q96N35 136 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 OR8B2Q96RD0 313 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 DDA1Q9BW61 102 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 HEXA-AS1Q9H8Q6 139 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 TECRQ9NZ01 308 aaKnown RBP9.99□□□□□ -0.81
NOD1-201ENST00000222823 ELF5Q9UKW6 265 aaPredicted RBP9.99□□□□□ -0.81
NOD1-201ENST00000222823 LINC00862A6NCI5 91 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 FCN1O00602 326 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 PIN1P1O15428 100 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 SYNGR1O43759 233 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 ISG15P05161 165 aa9.99□□□□□ -0.81
NOD1-201ENST00000222823 G6PCP35575 357 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms