RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 A0A1B0GU03 582 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 CTSDP07339 412 aaPredicted RBP11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 OR10J6PQ8NGY7 276 aa11.68□□□□□ -0.54
SYNGAP1-208ENST00000629380 RNASE1P07998 156 aaKnown RBP11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 TMEM196Q5HYL7 178 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 OR4A47Q6IF82 309 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 FAM53AQ6NSI3 398 aaPredicted RBP11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 SLC35E3Q7Z769 313 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 LINC00615Q96LM1 132 aaPredicted RBP11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 KLK11Q9UBX7 282 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 RABAC1Q9UI14 185 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 LY75O60449 1722 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 AKR7A2O43488 359 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 S1PR2O95136 353 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 DEGS2Q6QHC5 323 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 WDFY2Q96P53 400 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 TMPRSS13Q9BYE2 586 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 FZR1Q9UM11 496 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 HCFC1P51610 2035 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 SMIM14Q96QK8 99 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 PRSS50Q9UI38 385 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 NYNRINQ9P2P1 1898 aaKnown RBP11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 CA2P00918 260 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 TMEM140Q9NV12 185 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 AUP1Q9Y679 476 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 SHANK3Q9BYB0 1731 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 PRRT4C9JH25 899 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 GEMIN2O14893 280 aaKnown RBP11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 ACVR1Q04771 509 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 MT-CO3P00414 261 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 SKP2Q13309 424 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 DNLZQ5SXM8 178 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 SUCLG1P53597 346 aaKnown RBP11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 CCL7P80098 99 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 ALKBH7Q9BT30 221 aaPredicted RBP11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 IL20Q9NYY1 176 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 ZNF502Q8TBZ5 544 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 VAX2Q9UIW0 290 aa11.67□□□□□ -0.54
SYNGAP1-208ENST00000629380 COL19A1Q14993 1142 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 HERPUD1Q15011 391 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 CCSMST1Q4G0I0 132 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 PRSS54Q6PEW0 395 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 MRGPRDQ8TDS7 321 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 LINC00052Q96N35 136 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 FAM181BA6NEQ2 426 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 FGF9P31371 208 aaPredicted RBP11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 ECSCRQ19T08 205 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 ZNF738Q8NE65 137 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 ASB5Q8WWX0 329 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 HEXA-AS1Q9H8Q6 139 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 UBTD1Q9HAC8 227 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 SPTY2D1-AS1A0A0U1RR47 76 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 A0A1W2PS18 150 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 DIRC3C9JPN6 131 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 RFLNAQ6ZTI6 216 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 C10orf126Q8N4M7 172 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 GPR27Q9NS67 375 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 PITX3O75364 302 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 PRSS8Q16651 343 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 PABPC1L2AQ5JQF8 200 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 OR1L8Q8NGR8 309 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 GZMKP49863 264 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 BSXQ3C1V8 233 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 LGALSLQ3ZCW2 172 aaPredicted RBP11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 LRRC3BQ96PB8 259 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 SMDT1Q9H4I9 107 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 TNFSF10P50591 281 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 ZNF841Q6ZN19 808 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 C16orf82Q7Z2V1 217 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 TMEM210A6NLX4 147 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 CALHM1Q8IU99 346 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 TMEM183AQ8IXX5 376 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 ZNF275Q9NSD4 429 aaPredicted RBP11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 LOC102724200A0A096LPH7 203 aaPredicted RBP11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 EPPINO95925 133 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 ZXDAP98168 799 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 BRWD3Q6RI45 1802 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 TIMP4Q99727 224 aa11.66□□□□□ -0.54
SYNGAP1-208ENST00000629380 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 C3orf80F5H4A9 247 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 SNRPEP62304 92 aaKnown RBP11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 PRO1933Q9H354 126 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 MGAMO43451 1857 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 ADAMTSL1Q8N6G6 1762 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 PMELP40967 661 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 NEURL2Q9BR09 285 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 WSB2Q9NYS7 404 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 STPG3Q8N7X2 389 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 VWA8A3KMH1 1905 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 IFITM10A6NMD0 228 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 AWAT1Q58HT5 328 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 LILRA3Q8N6C8 439 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 TNRC6AQ8NDV7 1962 aaKnown RBP11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 PLPP2O43688 288 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 ZNF324O75467 553 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 OR10D3Q8NH80 312 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 LRRC61Q9BV99 259 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 TMIGD3P0DMS9 266 aaPredicted RBP11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 GABRA1P14867 456 aa11.65□□□□□ -0.54
SYNGAP1-208ENST00000629380 AVPR2P30518 371 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms