RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 HLA-DMAP28067 261 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 KIR2DS4P43632 304 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 TAS2R19P59542 299 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 RPL31P62899 125 aaKnown RBP6.64□□□□□ -1.35
CPNE3-209ENST00000620393 KIR2DS1Q14954 304 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 OXLD1Q5BKU9 147 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 C6orf183Q5T699 404 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 OR52W1Q6IF63 320 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 STEAP1BQ6NZ63 245 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 MOB1BQ7L9L4 216 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 ZNF554Q86TJ5 538 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 TPRX1Q8N7U7 411 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 OR5AP2Q8NGF4 316 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 OR13A1Q8NGR1 328 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 CLDND2Q8NHS1 167 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 SETD6Q8TBK2 473 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 MAFIPQ8WZ33 124 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 SNAPC3Q92966 411 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 COX4I2Q96KJ9 171 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 DCTN5Q9BTE1 182 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 ZNF286AQ9HBT8 521 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 HRASLSQ9HDD0 168 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 KCNIP1Q9NZI2 227 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 CLN8Q9UBY8 286 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 OPN4Q9UHM6 478 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 FBN2P35556 2912 aa6.64□□□□□ -1.35
CPNE3-209ENST00000620393 TRGV10A0A0A0MS01 117 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 TRBV23-1A0A0A0MS06 115 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 IGHV4-61A0A0C4DH41 118 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 NAP1L6A6NFF2 107 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 C15orf65H3BRN8 121 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 FABP7O15540 132 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 RAB3DO95716 219 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 PMP2P02689 132 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 SCTP09683 121 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 OR3A3P47888 321 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 RFX2P48378 723 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 TAS2R46P59540 309 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 DEFA1P59665 94 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 DEFA3P59666 94 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 SEC61A1P61619 476 aaKnown RBP6.63□□□□□ -1.35
CPNE3-209ENST00000620393 GNB2P62879 340 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 ASAH1Q13510 395 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 HMGN3Q15651 99 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 CHRFAM7AQ494W8 412 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 ACTBL2Q562R1 376 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 ESCO2Q56NI9 601 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 VAX1Q5SQQ9 334 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 CD276Q5ZPR3 534 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 TMEM200BQ69YZ2 307 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 TRAT1Q6PIZ9 186 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 DHRS11Q6UWP2 260 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 BTN2A1Q7KYR7 527 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 OVCH2Q7RTZ1 564 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 C5orf24Q7Z6I8 188 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 LY6G5BQ8NDX9 201 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 OR4A4PQ8NGN8 299 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 OR5H2Q8NGV7 314 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 MRGPRDQ8TDS7 321 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 H1FXQ92522 213 aaKnown RBP6.63□□□□□ -1.35
CPNE3-209ENST00000620393 GCN1Q92616 2671 aaKnown RBP6.63□□□□□ -1.35
CPNE3-209ENST00000620393 ARL11Q969Q4 196 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 RAB39BQ96DA2 213 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 DMRTB1Q96MA1 342 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 C7orf50Q9BRJ6 194 aaKnown RBP6.63□□□□□ -1.35
CPNE3-209ENST00000620393 SSBP3Q9BWW4 388 aaPredicted RBP6.63□□□□□ -1.35
CPNE3-209ENST00000620393 NARFLQ9H6Q4 476 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 LINC00574Q9H8X3 128 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 TAF9BQ9HBM6 251 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 TAS2R3Q9NYW6 316 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 LPAR3Q9UBY5 353 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 TBC1D24Q9ULP9 559 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 UBE2J1Q9Y385 318 aaPredicted RBP6.63□□□□□ -1.35
CPNE3-209ENST00000620393 LINC00312Q9Y6C7 94 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 CELSR2Q9HCU4 2923 aa6.63□□□□□ -1.35
CPNE3-209ENST00000620393 CRYBG3Q68DQ2 2970 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 LOC105371242A0A075B767 164 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 IGKV1-6A0A0C4DH72 117 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 KBTBD11-OT1A0A1B0GTJ5 212 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 ZNF729A6NN14 1252 aaPredicted RBP6.62□□□□□ -1.35
CPNE3-209ENST00000620393 CENPXA8MT69 81 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 C12orf77C9JDV5 145 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 NPIPB11E5RHQ5 1161 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 PHF1O43189 567 aaPredicted RBP6.62□□□□□ -1.35
CPNE3-209ENST00000620393 SPINT2O43291 252 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 LYRM1O43325 122 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 DIRAS3O95661 229 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 HBZP02008 142 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 HEXAP06865 529 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 ZNF735P0CB33 412 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 USF1P22415 310 aaPredicted RBP6.62□□□□□ -1.35
CPNE3-209ENST00000620393 ZFP36P26651 326 aaKnown RBP6.62□□□□□ -1.35
CPNE3-209ENST00000620393 HRH1P35367 487 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 FAUP35544 74 aaKnown RBP6.62□□□□□ -1.35
CPNE3-209ENST00000620393 ARPC4P59998 168 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 HLA-DRB3P79483 266 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 MEF2DQ14814 521 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 CDK10Q15131 360 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 C17orf58Q2M2W7 97 aa6.62□□□□□ -1.35
CPNE3-209ENST00000620393 RNASE10Q5GAN6 216 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms